Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400089787 | Potato | cytosol | 50.76 | 95.4 |
| PGSC0003DMT400088489 | Potato | nucleus | 56.27 | 86.39 |
| PGSC0003DMT400086919 | Potato | nucleus | 64.83 | 86.18 |
| PGSC0003DMT400095062 | Potato | nucleus | 70.34 | 81.56 |
| PGSC0003DMT400090953 | Potato | nucleus | 83.18 | 80.95 |
| PGSC0003DMT400095755 | Potato | nucleus | 82.57 | 78.49 |
| PGSC0003DMT400094113 | Potato | cytosol | 40.98 | 77.46 |
| PGSC0003DMT400094378 | Potato | nucleus | 35.78 | 75.0 |
| PGSC0003DMT400085623 | Potato | nucleus | 44.95 | 73.5 |
| PGSC0003DMT400090516 | Potato | nucleus | 39.76 | 73.45 |
| PGSC0003DMT400091650 | Potato | nucleus | 48.32 | 61.0 |
| PGSC0003DMT400003073 | Potato | cytosol | 18.96 | 57.41 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 60.24 | 56.45 |
| PGSC0003DMT400089454 | Potato | nucleus | 37.92 | 50.61 |
| PGSC0003DMT400086956 | Potato | nucleus | 22.32 | 49.66 |
| PGSC0003DMT400077258 | Potato | nucleus | 53.52 | 44.87 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.5 | 43.9 |
| PGSC0003DMT400073719 | Potato | nucleus | 34.56 | 43.3 |
| PGSC0003DMT400088008 | Potato | nucleus | 24.77 | 41.97 |
| PGSC0003DMT400085256 | Potato | nucleus | 46.48 | 40.21 |
| PGSC0003DMT400087890 | Potato | cytosol | 13.15 | 38.39 |
| PGSC0003DMT400090586 | Potato | nucleus | 27.52 | 38.3 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 13.15 | 36.75 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 41.9 | 35.77 |
| PGSC0003DMT400089615 | Potato | cytosol | 23.55 | 32.35 |
| PGSC0003DMT400095417 | Potato | cytosol | 12.54 | 32.03 |
| PGSC0003DMT400061726 | Potato | nucleus | 31.8 | 31.8 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.26 | 31.76 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 21.71 | 30.6 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 14.98 | 29.88 |
| PGSC0003DMT400091747 | Potato | plastid | 13.76 | 29.61 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 24.46 | 28.37 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 15.9 | 28.11 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 13.76 | 27.61 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 18.65 | 27.6 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 13.15 | 27.56 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 20.49 | 27.35 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 18.96 | 27.07 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 19.88 | 26.97 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 18.96 | 26.96 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 20.18 | 26.94 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 15.6 | 26.7 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 19.57 | 26.56 |
| Bra024521.1-P | Field mustard | mitochondrion | 13.15 | 26.54 |
| CDY04801 | Canola | mitochondrion, nucleus | 13.15 | 26.54 |
| CDY21372 | Canola | mitochondrion | 13.15 | 26.54 |
| Os03t0582400-01 | Rice | nucleus | 20.18 | 26.51 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 14.98 | 26.49 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 18.96 | 26.27 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 18.65 | 26.07 |
| PGSC0003DMT400086447 | Potato | cytosol | 15.29 | 26.04 |
| TraesCS7D01G548500.1 | Wheat | plastid | 18.65 | 25.96 |
| KXG28892 | Sorghum | nucleus | 14.68 | 25.95 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 14.68 | 25.95 |
| Bra012335.1-P | Field mustard | mitochondrion | 12.84 | 25.93 |
| CDY25744 | Canola | mitochondrion | 12.84 | 25.93 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 15.9 | 25.87 |
| EES06917 | Sorghum | mitochondrion, nucleus | 20.49 | 25.87 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 18.35 | 25.64 |
| PGSC0003DMT400065010 | Potato | vacuole | 15.6 | 25.5 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 18.04 | 25.43 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 21.41 | 25.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.43 | 24.46 |
| KXG32310 | Sorghum | nucleus | 18.04 | 24.38 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 16.82 | 24.23 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 16.82 | 24.23 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 14.37 | 24.1 |
| PGSC0003DMT400061722 | Potato | plastid | 7.65 | 24.04 |
| OQU83806 | Sorghum | nucleus | 12.84 | 24.0 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 13.46 | 23.91 |
| KXG28893 | Sorghum | nucleus | 12.23 | 23.81 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 17.13 | 23.73 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 17.74 | 23.67 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 17.43 | 23.65 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 17.13 | 23.24 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 13.46 | 23.16 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 13.46 | 23.04 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 15.9 | 22.91 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 15.9 | 22.91 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 13.15 | 22.87 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 16.82 | 22.82 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 13.76 | 22.61 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 17.13 | 22.58 |
| EES10067 | Sorghum | mitochondrion | 14.07 | 22.33 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 14.37 | 22.27 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 17.74 | 22.22 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 17.74 | 22.22 |
| Zm00001d016791_P001 | Maize | mitochondrion | 19.27 | 21.95 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 17.43 | 21.92 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.07 | 21.8 |
| KXG38099 | Sorghum | plastid | 20.8 | 21.59 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 16.51 | 21.51 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 16.51 | 21.51 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 13.76 | 21.23 |
| KXG28890 | Sorghum | mitochondrion | 16.51 | 21.18 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 16.82 | 21.07 |
| EER91288 | Sorghum | mitochondrion, nucleus | 20.18 | 21.02 |
| KXG28888 | Sorghum | nucleus | 15.9 | 20.39 |
| Zm00001d048894_P001 | Maize | mitochondrion | 15.29 | 20.24 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 18.96 | 19.81 |
| KXG28889 | Sorghum | nucleus | 14.98 | 19.6 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 12.23 | 19.51 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 18.35 | 19.17 |
| OQU83804 | Sorghum | mitochondrion | 13.76 | 19.15 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 12.54 | 18.06 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 14.98 | 15.96 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 14.68 | 15.53 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 15.29 | 15.48 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 15.29 | 15.48 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 14.37 | 15.16 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 14.68 | 14.91 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 15.29 | 13.77 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 14.98 | 13.76 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 13.15 | 12.95 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1DGF8 | InterPro:MADS_SRF-like | PFAM:PF00319 | EnsemblPlantsGene:PGSC0003DMG400038225 |
| PGSC:PGSC0003DMG400038225 | EnsemblPlants:PGSC0003DMT400088654 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002958F8A | SEG:seg |
Description
Mads box protein [Source:PGSC_GENE;Acc:PGSC0003DMG400038225]
Coordinates
chr5:+:43446588..43447571
Molecular Weight (calculated)
37455.5 Da
IEP (calculated)
8.603
GRAVY (calculated)
-0.557
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRNKVNYAF IEDDSKRKIS YNKRLKGLLK KSDELKTLCD VEVATVIYGP YRNEPYTFPN NDVVRNTFIK FKELPTLDRS KNMVTREEFT MQRIKKLEEQ
101: LQKVRKENRV KEMTNEMYEV FERKIVSVDM NPSYLNDLRC VIKKNLKQVR ELMIKEANGE GSTSNAPQPI VEPMVHSRNN SEGPLNPSPQ LFSQMFPPMV
201: PQLFSPMPQH MAIGKTPGLT HPMPSTIMDS LMPAPMIDSP MSSLMMVPPM YSPVSPTMNQ QIELSMDIPS IGISTSMNNN QNSSVDLPDS PTISGFLNWK
301: DDVVMTLLDD PFLKNINVQD PNHTKKF
101: LQKVRKENRV KEMTNEMYEV FERKIVSVDM NPSYLNDLRC VIKKNLKQVR ELMIKEANGE GSTSNAPQPI VEPMVHSRNN SEGPLNPSPQ LFSQMFPPMV
201: PQLFSPMPQH MAIGKTPGLT HPMPSTIMDS LMPAPMIDSP MSSLMMVPPM YSPVSPTMNQ QIELSMDIPS IGISTSMNNN QNSSVDLPDS PTISGFLNWK
301: DDVVMTLLDD PFLKNINVQD PNHTKKF
001: MRGKMKLSFI ENDSVRKTTF TKRKKGMLKK FNELVTLCGV DACAVIRSPY NSIQEPWPSR EGVEEVMSKF MEFSVLDRTK KMVDQETFLR QRIAKETERL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
Arabidopsis Description
PHE1MADS-box transcription factor PHERES 1 [Source:UniProtKB/Swiss-Prot;Acc:O80805]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.