Factsheet for Zm00001d013792_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d007949_P001
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013259_P002
Zm00001d013792_P001
Zm00001d016791_P001
Zm00001d017614_P003
Zm00001d018667_P003
Zm00001d022088_P004
Zm00001d023736_P001
Zm00001d028217_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d034045_P003
Zm00001d037212_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d044850_P001
Zm00001d045231_P002
Zm00001d047597_P001
Zm00001d048082_P001
Zm00001d048894_P001
Zm00001d051465_P002
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	Zm00001d007949_P001	AT1G69120.1	15805477
AT1G31630.1	Zm00001d013259_P002	AT1G69120.1	15805477
AT1G31630.1	Zm00001d018667_P003	AT1G69120.1	15805477
AT1G31630.1	Zm00001d022088_P004	AT1G69120.1	15805477
AT1G31630.1	Zm00001d023736_P001	AT1G69120.1	15805477
AT1G31630.1	Zm00001d034045_P003	AT1G69120.1	15805477
AT1G31630.1	Zm00001d028217_P001	AT2G03710.1	15805477
AT1G31630.1	Zm00001d045231_P002	AT2G03710.1	15805477
AT1G31630.1	Zm00001d048082_P001	AT2G03710.1	15805477
AT1G31630.1	Zm00001d017614_P003	AT2G45650.1	15805477
AT1G31630.1	Zm00001d051465_P002	AT2G45650.1	15805477
AT1G31630.1	Zm00001d013792_P001	AT5G27960.1	15805477
AT1G31630.1	Zm00001d016791_P001	AT5G27960.1	15805477
AT1G31630.1	Zm00001d048894_P001	AT5G27960.1	15805477
AT1G31640.1	Zm00001d007949_P001	AT1G69120.1	15805477
AT1G31640.1	Zm00001d013259_P002	AT1G69120.1	15805477
AT1G31640.1	Zm00001d018667_P003	AT1G69120.1	15805477
AT1G31640.1	Zm00001d022088_P004	AT1G69120.1	15805477
AT1G31640.1	Zm00001d023736_P001	AT1G69120.1	15805477
AT1G31640.1	Zm00001d034045_P003	AT1G69120.1	15805477
AT1G31640.1	Zm00001d028217_P001	AT2G03710.1	15805477
AT1G31640.1	Zm00001d045231_P002	AT2G03710.1	15805477
AT1G31640.1	Zm00001d048082_P001	AT2G03710.1	15805477
AT1G31640.1	Zm00001d017614_P003	AT2G45650.1	15805477
AT1G31640.1	Zm00001d051465_P002	AT2G45650.1	15805477
AT1G31640.1	Zm00001d013792_P001	AT5G27960.1	15805477
AT1G31640.1	Zm00001d016791_P001	AT5G27960.1	15805477
AT1G31640.1	Zm00001d048894_P001	AT5G27960.1	15805477
AT5G27960.1	Zm00001d013792_P001	AT1G31630.1	15805477
AT5G27960.1	Zm00001d016791_P001	AT1G31630.1	15805477
AT5G27960.1	Zm00001d048894_P001	AT1G31630.1	15805477
AT5G27960.1	Zm00001d013792_P001	AT1G31640.1	15805477
AT5G27960.1	Zm00001d016791_P001	AT1G31640.1	15805477
AT5G27960.1	Zm00001d048894_P001	AT1G31640.1	15805477
AT5G27960.1	Zm00001d037212_P001	AT1G77980.1	15805477
AT5G27960.1	Zm00001d044850_P001	AT1G77980.1	15805477
AT5G48670.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT5G48670.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT5G48670.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT5G48670.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT5G48670.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT5G48670.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT5G48670.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT5G48670.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT5G48670.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT5G48670.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT5G48670.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016791_P001	Maize	mitochondrion	80.94	78.4
GSMUA_Achr2P18410_001	Banana	nucleus	10.79	73.17
KXG38099	Sorghum	plastid	81.3	71.75
EER91288	Sorghum	mitochondrion, nucleus	75.18	66.56
TraesCS6A01G020500.1	Wheat	mitochondrion, nucleus	29.14	51.92
GSMUA_Achr3P08500_001	Banana	nucleus	41.37	50.0
HORVU6Hr1G003730.1	Barley	nucleus	15.11	49.41
TraesCS3A01G312600.1	Wheat	nucleus	43.53	48.21
TraesCS6A01G359100.1	Wheat	mitochondrion	43.53	46.36
TraesCS6D01G342100.1	Wheat	mitochondrion	43.53	46.36
TraesCS3B01G159600.1	Wheat	nucleus	41.73	46.22
HORVU7Hr1G121600.1	Barley	nucleus	30.22	45.41
GSMUA_Achr2P18400_001	Banana	nucleus	37.77	45.26
TraesCS6B01G391800.1	Wheat	mitochondrion	42.45	45.21
GSMUA_AchrUn_...	Banana	nucleus	37.41	44.64
TraesCS6D01G342000.1	Wheat	nucleus	38.49	44.4
HORVU6Hr1G085570.1	Barley	mitochondrion, nucleus	41.37	44.23
TraesCS7B01G484600.1	Wheat	nucleus	25.9	43.9
TraesCS6D01G023800.1	Wheat	mitochondrion	35.61	43.61
TraesCS6D01G024000.1	Wheat	mitochondrion, nucleus	28.78	43.48
TraesCS6B01G391600.1	Wheat	nucleus	38.13	43.27
TraesCS6B01G391700.1	Wheat	nucleus	38.13	43.27
TraesCS6D01G341700.1	Wheat	nucleus	37.41	43.15
HORVU6Hr1G085540.1	Barley	mitochondrion	35.25	42.79
TraesCS6B01G027900.1	Wheat	nucleus	34.89	42.73
TraesCS6B01G028100.1	Wheat	mitochondrion	28.42	42.02
TraesCS6A01G358900.1	Wheat	nucleus	35.61	41.95
TraesCS2B01G171700.1	Wheat	mitochondrion	28.78	41.88
TraesCS6A01G020900.1	Wheat	mitochondrion	30.94	40.76
TraesCS6B01G028300.1	Wheat	mitochondrion	30.94	40.76
TraesCS7D01G551000.1	Wheat	nucleus	34.53	40.68
TraesCS7D01G550500.1	Wheat	nucleus	26.98	40.54
TraesCS7B01G484500.1	Wheat	nucleus	34.89	40.25
GSMUA_Achr3P24560_001	Banana	nucleus	33.45	40.09
KRG88863	Soybean	mitochondrion, nucleus	20.14	40.0
TraesCS7D01G550600.1	Wheat	nucleus	34.53	39.83
TraesCS2D01G128000.1	Wheat	nucleus	30.22	39.62
TraesCS7B01G484000.1	Wheat	nucleus	26.26	39.46
TraesCS7B01G484100.1	Wheat	mitochondrion, nucleus	34.17	39.42
VIT_14s0060g00300.t01	Wine grape	nucleus	33.45	39.41
KRG97962	Soybean	nucleus	33.81	39.33
TraesCS7A01G559500.1	Wheat	nucleus	26.26	38.22
TraesCS6D01G341800.1	Wheat	mitochondrion, nucleus	33.81	37.9
KRG89836	Soybean	nucleus	20.14	37.58
KRH30919	Soybean	nucleus	32.37	37.19
HORVU2Hr1G022060.1	Barley	nucleus, plastid	27.34	37.07
Bra024521.1-P	Field mustard	mitochondrion	21.22	36.42
CDY04801	Canola	mitochondrion, nucleus	21.22	36.42
CDY21372	Canola	mitochondrion	21.22	36.42
Solyc01g102260.2.1	Tomato	nucleus	32.37	36.14
GSMUA_Achr8P06150_001	Banana	nucleus	31.65	35.92
TraesCS6A01G022700.1	Wheat	mitochondrion	29.14	35.68
TraesCS6D01G024300.1	Wheat	mitochondrion	29.14	35.68
Zm00001d048894_P001	Maize	mitochondrion	31.65	35.63
CDY33537	Canola	nucleus	24.82	35.2
AT1G22590.2	Thale cress	mitochondrion, nucleus	20.5	34.97
Bra012335.1-P	Field mustard	mitochondrion	20.14	34.57
CDY25744	Canola	mitochondrion	20.14	34.57
KRG98149	Soybean	nucleus	26.26	34.27
KRH33740	Soybean	nucleus	19.42	33.96
AT5G27810.1	Thale cress	cytosol, nucleus, plastid	14.39	33.61
TraesCS7D01G536700.1	Wheat	nucleus	37.77	33.55
KRH30476	Soybean	nucleus	17.99	33.33
KRG98150	Soybean	mitochondrion, nucleus	19.78	32.93
Bra005166.1-P	Field mustard	mitochondrion, nucleus	14.75	32.8
KRG98152	Soybean	nucleus	22.3	32.63
TraesCS7A01G551000.1	Wheat	nucleus	36.69	32.59
KRH66114	Soybean	nucleus	23.02	32.32
AT5G26630.1	Thale cress	nucleus	25.18	32.11
CDX80580	Canola	nucleus	23.02	31.68
PGSC0003DMT400089787	Potato	cytosol	19.78	31.61
PGSC0003DMT400086956	Potato	nucleus	16.55	31.29
KRH30113	Soybean	nucleus	19.06	30.99
KRH30472	Soybean	nucleus	23.38	30.66
CDX88234	Canola	nucleus	20.14	30.6
CDY64992	Canola	mitochondrion, nucleus	16.91	30.52
KRH72060	Soybean	nucleus	18.7	30.41
TraesCS7B01G299400.1	Wheat	nucleus	35.25	30.34
TraesCS7D01G393000.1	Wheat	nucleus	35.25	30.34
KRH30473	Soybean	mitochondrion, nucleus	23.74	29.86
KRH30119	Soybean	cytosol	17.27	29.81
Bra020555.1-P	Field mustard	nucleus	22.66	29.17
CDY05540	Canola	nucleus	22.66	29.17
CDY25000	Canola	nucleus	22.66	29.17
CDY71896	Canola	nucleus	17.99	29.07
Bra009913.1-P	Field mustard	nucleus	21.22	29.06
KRG98143	Soybean	nucleus	21.94	28.91
TraesCS7A01G398800.1	Wheat	nucleus	33.45	28.88
TraesCS6A01G359700.1	Wheat	nucleus	23.02	28.19
KRH66052	Soybean	mitochondrion, nucleus	22.66	28.0
KRG98148	Soybean	nucleus	22.66	27.51
TraesCS6D01G342700.1	Wheat	nucleus	30.58	27.51
KRG98142	Soybean	nucleus	25.54	26.59
KRG88915	Soybean	mitochondrion, nucleus	19.78	26.57
TraesCS6B01G392600.1	Wheat	nucleus	29.14	26.13
KRG98147	Soybean	mitochondrion, nucleus	23.74	25.68
Bra029469.1-P	Field mustard	nucleus	28.06	25.66
CDY60402	Canola	nucleus	28.06	25.66
TraesCS2D01G150900.1	Wheat	mitochondrion	28.06	25.41
AT3G05860.1	Thale cress	nucleus	23.74	25.38
Bra018490.1-P	Field mustard	nucleus	26.26	25.17
CDX97329	Canola	nucleus	26.26	25.17
PGSC0003DMT400003073	Potato	cytosol	9.71	25.0
CDY27735	Canola	nucleus	23.74	24.72
PGSC0003DMT400089454	Potato	nucleus	21.58	24.49
AT5G48670.1	Thale cress	nucleus	28.06	24.3
KRH72066	Soybean	mitochondrion, nucleus	17.99	24.27
TraesCS2B01G146100.1	Wheat	nucleus	31.65	24.24
HORVU6Hr1G085670.1	Barley	nucleus	28.78	24.1
AT1G65330.1	Thale cress	nucleus	24.1	24.01
PGSC0003DMT400088489	Potato	nucleus	18.35	23.94
AT1G65300.1	Thale cress	nucleus	23.74	23.74
PGSC0003DMT400073719	Potato	nucleus	21.58	22.99
AT5G35120.1	Thale cress	cytosol	8.63	22.43
Bra039404.1-P	Field mustard	nucleus	24.1	22.19
TraesCS2A01G146400.1	Wheat	mitochondrion	27.7	21.63
PGSC0003DMT400088654	Potato	nucleus	25.18	21.41
PGSC0003DMT400090586	Potato	nucleus	17.99	21.28
Bra041022.1-P	Field mustard	nucleus	25.54	21.26
PGSC0003DMT400091650	Potato	nucleus	19.78	21.24
CDY05207	Canola	nucleus	25.18	20.96
CDY27734	Canola	nucleus	25.18	20.83
PGSC0003DMT400090953	Potato	nucleus	25.18	20.83
KRH30471	Soybean	nucleus	22.66	20.79
CDX88231	Canola	nucleus	20.5	20.65
KRG88914	Soybean	cytosol	16.19	20.55
CDX80577	Canola	mitochondrion, nucleus	21.94	20.27
PGSC0003DMT400095755	Potato	nucleus	24.82	20.06
AT5G27960.1	Thale cress	nucleus	23.02	20.0
PGSC0003DMT400095062	Potato	nucleus	20.14	19.86
AT1G59930.1	Thale cress	cytosol	9.35	19.7
KRG98146	Soybean	nucleus	23.02	19.51
KRG88862	Soybean	nucleus	21.94	19.49
CDY38696	Canola	nucleus	19.42	19.42
Bra035448.1-P	Field mustard	nucleus	18.35	19.32
Bra035449.1-P	Field mustard	nucleus	17.99	18.94
PGSC0003DMT400088008	Potato	nucleus	12.95	18.65
PGSC0003DMT400090516	Potato	nucleus	11.87	18.64
CDY18830	Canola	nucleus	23.02	18.6
AT5G26650.1	Thale cress	nucleus	24.1	18.31
AT2G28700.1	Thale cress	nucleus	21.58	18.24
CDY71564	Canola	nucleus	21.58	17.7
AT5G26580.1	Thale cress	nucleus	21.58	17.39
Bra009911.1-P	Field mustard	mitochondrion, nucleus	22.66	17.31
AT1G31630.1	Thale cress	mitochondrion	20.86	17.11
Bra020552.1-P	Field mustard	nucleus	20.86	17.01
PGSC0003DMT400061726	Potato	nucleus	19.78	16.82
CDY70782	Canola	nucleus	19.42	16.72
PGSC0003DMT400077258	Potato	nucleus	23.38	16.67
PGSC0003DMT400095426	Potato	mitochondrion	20.14	16.05
Bra040248.1-P	Field mustard	nucleus	23.38	15.74
Bra020550.1-P	Field mustard	nucleus	21.22	15.53
PGSC0003DMT400061724	Potato	mitochondrion, nucleus	21.22	15.4
CDY05333	Canola	nucleus	20.86	15.38
PGSC0003DMT400087890	Potato	cytosol	6.12	15.18
CDY05515	Canola	nucleus	20.5	15.12
CDY67043	Canola	nucleus	20.86	14.83
PGSC0003DMT400085256	Potato	nucleus	19.78	14.55
PGSC0003DMT400085623	Potato	nucleus	10.43	14.5
Bra020525.1-P	Field mustard	nucleus	20.14	14.18
PGSC0003DMT400086919	Potato	nucleus	12.23	13.82
AT1G31640.1	Thale cress	mitochondrion	22.66	13.58
Bra020524.1-P	Field mustard	nucleus	16.55	12.78
CDY05514	Canola	nucleus	16.55	12.78
PGSC0003DMT400095417	Potato	cytosol	5.76	12.5
Solyc07g043080.1.1	Tomato	cytosol	4.68	10.48
CDY05205	Canola	cytosol, mitochondrion, nucleus	6.12	10.43
PGSC0003DMT400086447	Potato	cytosol	7.19	10.42
PGSC0003DMT400094113	Potato	cytosol	6.12	9.83
PGSC0003DMT400094378	Potato	nucleus	5.04	8.97
PGSC0003DMT400085114	Potato	cytosol, endoplasmic reticulum, nucleus	8.99	8.87
PGSC0003DMT400097522	Potato	cytosol, extracellular, mitochondrion, nucleus	2.52	5.98
PGSC0003DMT400085093	Potato	extracellular, plastid, vacuole	3.96	5.47
PGSC0003DMT400089615	Potato	cytosol	4.68	5.46
PGSC0003DMT400091747	Potato	plastid	2.88	5.26
PGSC0003DMT400065010	Potato	vacuole	3.6	5.0
PGSC0003DMT400061722	Potato	plastid	1.8	4.81

Protein Annotations

EntrezGene:103628054	MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A060D145	ProteinID:AIB05207.1	ProteinID:AQK64374.1
ncoils:Coil	GO:GO:0000982	GO:GO:0000987	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879
InterPro:MADS_SRF-like	PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF153
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0002207E71	EnsemblPlantsGene:Zm00001d013792
EnsemblPlants:Zm00001d013792_P001	EnsemblPlants:Zm00001d013792_T001	SEG:seg	:	:	:

Description

MADS-transcription factor 64Agamous-like MADS-box protein AGL80

Coordinates

chr5:-:20265968..20266804

Molecular Weight (calculated)

30067.1 Da

IEP (calculated)

7.745

GRAVY (calculated)

-0.424

Length

278 amino acids

Sequence
(BLAST)

001: MARKKVTLQW IANDSTRRAT FKKRRKGLMK KASELATLCD VDACVVVYGE EESQPEVWPD VAEAARVLAR FKAMPELDQC KKMMDMEGFL NQRIDKLKEQ
101: LHKAQRENRE RETTLLLHDA IVGRRPGLAG LSAEEIAGLG WMVENRLHGV REAIERLQAA ADKGGQGQQF SGVPPTSLQL QLPYSIIGPA GHTDVHHQAP
201: PPHPHPHPHP QGSWLMEVAK AGGDLGALVY SGFGGGRGSV GGAGGTSTEV ADMLPHLGGF GAGFGWPDPG LSPPFPPM

Best Arabidopsis Sequence Match ( AT5G48670.1 )
(BLAST)

001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H

Arabidopsis Description

AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.