Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G27960.1 | Thale cress | nucleus | 82.51 | 94.38 |
| AT5G26580.1 | Thale cress | nucleus | 78.42 | 83.19 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.19 | 46.34 |
| AT1G65300.1 | Thale cress | nucleus | 33.33 | 43.88 |
| AT1G59930.1 | Thale cress | cytosol | 15.3 | 42.42 |
| AT5G35120.1 | Thale cress | cytosol | 12.02 | 41.12 |
| AT1G31630.1 | Thale cress | mitochondrion | 37.7 | 40.71 |
| AT1G65330.1 | Thale cress | nucleus | 30.6 | 40.14 |
| CDX80577 | Canola | mitochondrion, nucleus | 32.24 | 39.2 |
| CDX88231 | Canola | nucleus | 29.51 | 39.13 |
| CDY71896 | Canola | nucleus | 18.31 | 38.95 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 12.57 | 38.66 |
| AT5G26630.1 | Thale cress | nucleus | 22.13 | 37.16 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 36.89 | 37.09 |
| Bra020552.1-P | Field mustard | nucleus | 31.69 | 34.02 |
| CDY71564 | Canola | nucleus | 31.15 | 33.63 |
| Bra020550.1-P | Field mustard | nucleus | 34.7 | 33.42 |
| CDY67043 | Canola | nucleus | 35.25 | 32.99 |
| Bra020524.1-P | Field mustard | nucleus | 31.69 | 32.22 |
| CDY05514 | Canola | nucleus | 31.69 | 32.22 |
| CDY05333 | Canola | nucleus | 33.06 | 32.1 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 13.66 | 32.05 |
| CDY05515 | Canola | nucleus | 32.79 | 31.83 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 7.38 | 31.76 |
| AT1G31640.1 | Thale cress | mitochondrion | 40.16 | 31.68 |
| CDY70782 | Canola | nucleus | 27.32 | 30.96 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 15.85 | 30.53 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 18.31 | 30.32 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 16.12 | 30.26 |
| Bra020525.1-P | Field mustard | nucleus | 32.51 | 30.13 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 18.85 | 30.0 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 16.12 | 29.65 |
| AT3G05860.1 | Thale cress | nucleus | 20.49 | 28.85 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 18.03 | 28.45 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 12.57 | 28.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.49 | 27.47 |
| AT5G48670.1 | Thale cress | nucleus | 24.04 | 27.41 |
| KXG28892 | Sorghum | nucleus | 13.66 | 27.03 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 15.57 | 27.01 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 16.67 | 26.87 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 13.39 | 26.63 |
| OQU83806 | Sorghum | nucleus | 12.57 | 26.29 |
| KXG28893 | Sorghum | nucleus | 12.02 | 26.19 |
| PGSC0003DMT400003073 | Potato | cytosol | 7.65 | 25.93 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 13.39 | 25.65 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.85 | 25.55 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 13.11 | 25.53 |
| TraesCS7D01G548500.1 | Wheat | plastid | 16.39 | 25.53 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 16.12 | 25.43 |
| EES10067 | Sorghum | mitochondrion | 14.21 | 25.24 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 16.12 | 25.21 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.48 | 25.12 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 11.2 | 25.0 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 12.57 | 24.86 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 15.85 | 24.79 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 17.21 | 24.14 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 18.31 | 24.1 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 16.12 | 24.08 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 16.12 | 24.08 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 16.12 | 24.08 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 16.39 | 23.9 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 12.02 | 23.78 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 12.02 | 23.78 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 16.94 | 23.75 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 16.94 | 23.75 |
| Os03t0582400-01 | Rice | nucleus | 16.12 | 23.69 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 14.75 | 23.58 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 16.67 | 23.46 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 14.48 | 23.35 |
| KXG32310 | Sorghum | nucleus | 15.3 | 23.14 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 12.02 | 23.04 |
| KXG28889 | Sorghum | nucleus | 15.57 | 22.8 |
| EES06917 | Sorghum | mitochondrion, nucleus | 16.12 | 22.78 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 15.57 | 22.71 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 14.21 | 22.03 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 14.48 | 21.99 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 14.48 | 21.99 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 12.3 | 21.95 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 13.93 | 21.61 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 13.39 | 21.59 |
| KXG28890 | Sorghum | mitochondrion | 15.03 | 21.57 |
| Zm00001d048894_P001 | Maize | mitochondrion | 14.48 | 21.46 |
| AT2G28700.1 | Thale cress | nucleus | 19.13 | 21.28 |
| OQU83804 | Sorghum | mitochondrion | 13.66 | 21.28 |
| Zm00001d016791_P001 | Maize | mitochondrion | 16.67 | 21.25 |
| KXG28888 | Sorghum | nucleus | 14.75 | 21.18 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 13.93 | 21.16 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 13.66 | 20.75 |
| KXG38099 | Sorghum | plastid | 17.76 | 20.63 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 13.39 | 20.33 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 13.66 | 20.16 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 12.02 | 19.38 |
| EER91288 | Sorghum | mitochondrion, nucleus | 16.39 | 19.11 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 10.93 | 18.87 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 14.75 | 16.72 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 14.21 | 16.15 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 14.21 | 16.1 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 13.39 | 15.65 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 13.11 | 15.53 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 13.11 | 15.34 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 12.57 | 14.98 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 12.57 | 14.84 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 13.66 | 13.77 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 13.39 | 13.76 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 12.3 | 13.55 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.92 | 7.56 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832724 | ProteinID:AAC13588.1 | ProteinID:AED93581.1 | Symbol:AGL36 |
| ArrayExpress:AT5G26650 | EnsemblPlantsGene:AT5G26650 | RefSeq:AT5G26650 | TAIR:AT5G26650 | RefSeq:AT5G26650-TAIR-G | EnsemblPlants:AT5G26650.1 |
| TAIR:AT5G26650.1 | EMBL:AY141247 | Unigene:At.49065 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_850880.2 | PFAM:PF00319 |
| PO:PO:0009001 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | UniProt:Q7XJK6 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00001B24ED | SEG:seg |
Description
AGL36Agamous-like MADS-box protein AGL36 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK6]
Coordinates
chr5:+:9343785..9345011
Molecular Weight (calculated)
41813.5 Da
IEP (calculated)
6.286
GRAVY (calculated)
-0.546
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKVKLSLIA NERSRKTSFI KRKDGIFKKL HELSTLCGVQ ACALIYSPFI PVPESWPSRE GAKKVASRFL EMPPTARTKK MMDQETYLME RITKAKEQLK
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.