Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25000 | Canola | nucleus | 62.39 | 62.96 |
| CDY05540 | Canola | nucleus | 61.01 | 61.57 |
| Bra020555.1-P | Field mustard | nucleus | 61.01 | 61.57 |
| CDX80580 | Canola | nucleus | 51.83 | 55.94 |
| CDX88234 | Canola | nucleus | 46.33 | 55.19 |
| Bra009913.1-P | Field mustard | nucleus | 49.54 | 53.2 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 9.63 | 51.22 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 22.48 | 41.18 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 13.76 | 35.29 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 24.31 | 33.97 |
| AT1G65330.1 | Thale cress | nucleus | 41.28 | 32.26 |
| AT1G65300.1 | Thale cress | nucleus | 39.91 | 31.3 |
| KXG28892 | Sorghum | nucleus | 26.15 | 30.81 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 31.19 | 30.77 |
| EES10067 | Sorghum | mitochondrion | 28.44 | 30.1 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 22.48 | 29.88 |
| KXG28893 | Sorghum | nucleus | 22.94 | 29.76 |
| OQU83806 | Sorghum | nucleus | 23.39 | 29.14 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 30.73 | 29.13 |
| AT5G48670.1 | Thale cress | nucleus | 42.66 | 28.97 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 30.28 | 28.45 |
| AT5G35120.1 | Thale cress | cytosol | 13.76 | 28.04 |
| PGSC0003DMT400003073 | Potato | cytosol | 13.76 | 27.78 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 20.64 | 27.61 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 22.94 | 27.03 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 23.39 | 26.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.44 | 26.61 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 22.94 | 26.32 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 22.94 | 26.18 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 22.02 | 26.09 |
| OQU83804 | Sorghum | mitochondrion | 27.98 | 25.96 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 22.02 | 25.95 |
| AT3G05860.1 | Thale cress | nucleus | 30.73 | 25.77 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 27.06 | 25.76 |
| AT1G59930.1 | Thale cress | cytosol | 15.6 | 25.76 |
| Os03t0582400-01 | Rice | nucleus | 29.36 | 25.7 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 22.94 | 25.64 |
| TraesCS7D01G548500.1 | Wheat | plastid | 27.52 | 25.53 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 29.36 | 25.5 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 27.06 | 25.43 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 21.56 | 25.41 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 28.44 | 25.31 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 27.06 | 25.21 |
| KXG28889 | Sorghum | nucleus | 28.9 | 25.2 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 32.11 | 25.18 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 22.94 | 25.13 |
| Zm00001d048894_P001 | Maize | mitochondrion | 28.44 | 25.1 |
| KXG28890 | Sorghum | mitochondrion | 29.36 | 25.1 |
| KXG28888 | Sorghum | nucleus | 29.36 | 25.1 |
| EES06917 | Sorghum | mitochondrion, nucleus | 29.82 | 25.1 |
| Zm00001d016791_P001 | Maize | mitochondrion | 33.03 | 25.09 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 21.56 | 25.0 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 26.61 | 24.79 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 28.44 | 24.7 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 25.69 | 24.67 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 29.36 | 24.52 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 23.39 | 24.17 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 23.39 | 24.17 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 28.9 | 24.14 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 28.9 | 24.14 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 27.06 | 24.08 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 27.06 | 24.08 |
| AT5G27960.1 | Thale cress | nucleus | 34.86 | 23.75 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 22.02 | 23.41 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 24.31 | 23.35 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 24.31 | 23.35 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 25.23 | 23.31 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 27.52 | 23.08 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 23.85 | 22.91 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 24.77 | 22.41 |
| KXG38099 | Sorghum | plastid | 32.11 | 22.22 |
| AT5G26650.1 | Thale cress | nucleus | 37.16 | 22.13 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 22.94 | 22.03 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 24.77 | 21.77 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 23.85 | 21.58 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 23.85 | 21.58 |
| AT5G26580.1 | Thale cress | nucleus | 33.95 | 21.45 |
| AT1G31630.1 | Thale cress | mitochondrion | 33.03 | 21.24 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 22.94 | 21.19 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 23.39 | 21.16 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 20.18 | 20.75 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 22.94 | 20.75 |
| EER91288 | Sorghum | mitochondrion, nucleus | 29.82 | 20.7 |
| KXG32310 | Sorghum | nucleus | 22.94 | 20.66 |
| AT2G28700.1 | Thale cress | nucleus | 29.36 | 19.45 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 25.69 | 17.89 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 26.15 | 17.65 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 25.69 | 17.34 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 23.85 | 16.94 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 24.31 | 16.93 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 24.77 | 16.77 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 23.39 | 16.5 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 22.48 | 15.81 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 24.77 | 15.17 |
| AT1G31640.1 | Thale cress | mitochondrion | 32.11 | 15.09 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 21.1 | 13.86 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 21.56 | 12.95 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.59 | 4.2 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832726 | ProteinID:AED93583.1 | ArrayExpress:AT5G26630 | EnsemblPlantsGene:AT5G26630 |
| RefSeq:AT5G26630 | TAIR:AT5G26630 | RefSeq:AT5G26630-TAIR-G | EnsemblPlants:AT5G26630.1 | TAIR:AT5G26630.1 | EMBL:AY141246 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | RefSeq:NP_850882.2 | PFAM:PF00319 | PO:PO:0000005 |
| PO:PO:0000293 | PO:PO:0007611 | PO:PO:0009046 | PO:PO:0009089 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | UniProt:Q7XJK7 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI00001B24EC | SEG:seg | : | : | : |
Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
Coordinates
chr5:+:9350812..9351620
Molecular Weight (calculated)
25124.7 Da
IEP (calculated)
10.418
GRAVY (calculated)
-0.581
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.