Factsheet for HORVU2Hr1G022060.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU0Hr1G032300.1
HORVU2Hr1G016740.4
HORVU2Hr1G022060.1
HORVU2Hr1G063800.7
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G003610.5
HORVU4Hr1G026290.3
HORVU4Hr1G067680.14
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU5Hr1G095630.3
HORVU6Hr1G003730.1
HORVU6Hr1G066140.9
HORVU6Hr1G085540.1
HORVU6Hr1G085570.1
HORVU6Hr1G085670.1
HORVU7Hr1G025700.6
HORVU7Hr1G121600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	HORVU2Hr1G063800.7	AT1G69120.1	15805477
AT1G31630.1	HORVU5Hr1G095630.3	AT1G69120.1	15805477
AT1G31630.1	HORVU4Hr1G067680.14	AT2G03710.1	15805477
AT1G31630.1	HORVU7Hr1G025700.6	AT2G03710.1	15805477
AT1G31630.1	HORVU0Hr1G032300.1	AT2G45650.1	15805477
AT1G31630.1	HORVU6Hr1G066140.9	AT2G45650.1	15805477
AT1G31630.1	HORVU2Hr1G022060.1	AT5G27960.1	15805477
AT1G31630.1	HORVU6Hr1G003730.1	AT5G27960.1	15805477
AT1G31630.1	HORVU6Hr1G085540.1	AT5G27960.1	15805477
AT1G31630.1	HORVU6Hr1G085570.1	AT5G27960.1	15805477
AT1G31630.1	HORVU6Hr1G085670.1	AT5G27960.1	15805477
AT1G31630.1	HORVU7Hr1G121600.1	AT5G27960.1	15805477
AT1G31640.1	HORVU2Hr1G063800.7	AT1G69120.1	15805477
AT1G31640.1	HORVU5Hr1G095630.3	AT1G69120.1	15805477
AT1G31640.1	HORVU4Hr1G067680.14	AT2G03710.1	15805477
AT1G31640.1	HORVU7Hr1G025700.6	AT2G03710.1	15805477
AT1G31640.1	HORVU0Hr1G032300.1	AT2G45650.1	15805477
AT1G31640.1	HORVU6Hr1G066140.9	AT2G45650.1	15805477
AT1G31640.1	HORVU2Hr1G022060.1	AT5G27960.1	15805477
AT1G31640.1	HORVU6Hr1G003730.1	AT5G27960.1	15805477
AT1G31640.1	HORVU6Hr1G085540.1	AT5G27960.1	15805477
AT1G31640.1	HORVU6Hr1G085570.1	AT5G27960.1	15805477
AT1G31640.1	HORVU6Hr1G085670.1	AT5G27960.1	15805477
AT1G31640.1	HORVU7Hr1G121600.1	AT5G27960.1	15805477
AT5G27960.1	HORVU2Hr1G022060.1	AT1G31630.1	15805477
AT5G27960.1	HORVU6Hr1G003730.1	AT1G31630.1	15805477
AT5G27960.1	HORVU6Hr1G085540.1	AT1G31630.1	15805477
AT5G27960.1	HORVU6Hr1G085570.1	AT1G31630.1	15805477
AT5G27960.1	HORVU6Hr1G085670.1	AT1G31630.1	15805477
AT5G27960.1	HORVU7Hr1G121600.1	AT1G31630.1	15805477
AT5G27960.1	HORVU2Hr1G022060.1	AT1G31640.1	15805477
AT5G27960.1	HORVU6Hr1G003730.1	AT1G31640.1	15805477
AT5G27960.1	HORVU6Hr1G085540.1	AT1G31640.1	15805477
AT5G27960.1	HORVU6Hr1G085570.1	AT1G31640.1	15805477
AT5G27960.1	HORVU6Hr1G085670.1	AT1G31640.1	15805477
AT5G27960.1	HORVU7Hr1G121600.1	AT1G31640.1	15805477
AT5G27960.1	HORVU4Hr1G003610.5	AT1G77980.1	15805477
AT5G48670.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT5G48670.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT5G48670.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT5G48670.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT5G48670.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT5G48670.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT5G48670.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT5G48670.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT5G48670.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT5G48670.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT5G48670.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT5G48670.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT5G48670.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT5G48670.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT5G48670.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT5G48670.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT5G48670.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT5G48670.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT5G48670.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT5G48670.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT5G48670.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT5G48670.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT5G48670.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT5G48670.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G128000.1	Wheat	nucleus	61.95	59.91
GSMUA_Achr2P18410_001	Banana	nucleus	11.22	56.1
HORVU6Hr1G003730.1	Barley	nucleus	22.93	55.29
HORVU7Hr1G121600.1	Barley	nucleus	37.56	41.62
TraesCS2B01G146100.1	Wheat	nucleus	71.71	40.5
HORVU6Hr1G085540.1	Barley	mitochondrion	44.88	40.17
TraesCS2A01G146400.1	Wheat	mitochondrion	67.8	39.04
HORVU6Hr1G085570.1	Barley	mitochondrion, nucleus	42.44	33.46
Bra005166.1-P	Field mustard	mitochondrion, nucleus	19.02	31.2
KRG88863	Soybean	mitochondrion, nucleus	19.51	28.57
HORVU6Hr1G085670.1	Barley	nucleus	45.85	28.31
KRH33740	Soybean	nucleus	21.95	28.3
GSMUA_Achr3P08500_001	Banana	nucleus	31.71	28.26
CDY64992	Canola	mitochondrion, nucleus	20.98	27.92
EES06917	Sorghum	mitochondrion, nucleus	34.63	27.41
Zm00001d013792_P001	Maize	mitochondrion, nucleus	37.07	27.34
KRG89836	Soybean	nucleus	19.51	26.85
GSMUA_Achr2P18400_001	Banana	nucleus	29.27	25.86
AT1G22590.2	Thale cress	mitochondrion, nucleus	20.49	25.77
CDY33537	Canola	nucleus	24.39	25.51
Zm00001d016791_P001	Maize	mitochondrion	35.12	25.09
GSMUA_AchrUn_...	Banana	nucleus	28.29	24.89
PGSC0003DMT400086956	Potato	nucleus	17.56	24.49
VIT_14s0060g00300.t01	Wine grape	nucleus	27.8	24.15
GSMUA_Achr3P24560_001	Banana	nucleus	27.32	24.14
Bra012335.1-P	Field mustard	mitochondrion	19.02	24.07
CDY25744	Canola	mitochondrion	19.02	24.07
Bra024521.1-P	Field mustard	mitochondrion	18.54	23.46
CDY04801	Canola	mitochondrion, nucleus	18.54	23.46
CDY21372	Canola	mitochondrion	18.54	23.46
KRG98150	Soybean	mitochondrion, nucleus	19.02	23.35
KRH30476	Soybean	nucleus	17.07	23.33
GSMUA_Achr8P06150_001	Banana	nucleus	27.8	23.27
KXG38099	Sorghum	plastid	35.61	23.17
KRH30113	Soybean	nucleus	19.02	22.81
KRG98152	Soybean	nucleus	20.98	22.63
KRG97962	Soybean	nucleus	26.34	22.59
EER91288	Sorghum	mitochondrion, nucleus	34.15	22.29
KRH72060	Soybean	nucleus	18.54	22.22
AT5G26630.1	Thale cress	nucleus	23.41	22.02
KRH30919	Soybean	nucleus	25.85	21.9
CDX80580	Canola	nucleus	21.46	21.78
KRH66114	Soybean	nucleus	20.49	21.21
AT5G27810.1	Thale cress	cytosol, nucleus, plastid	12.2	21.01
CDY71896	Canola	nucleus	17.56	20.93
Solyc01g102260.2.1	Tomato	nucleus	25.37	20.88
KRH30473	Soybean	mitochondrion, nucleus	22.44	20.81
CDX88234	Canola	nucleus	18.54	20.77
Bra009913.1-P	Field mustard	nucleus	20.49	20.69
PGSC0003DMT400089787	Potato	cytosol	17.56	20.69
KRG98149	Soybean	nucleus	21.46	20.66
KRH30472	Soybean	nucleus	20.98	20.28
CDY27735	Canola	nucleus	26.34	20.22
KRG98143	Soybean	nucleus	20.49	19.91
AT3G05860.1	Thale cress	nucleus	24.88	19.62
KRH30119	Soybean	cytosol	15.12	19.25
Bra020555.1-P	Field mustard	nucleus	20.0	18.98
CDY05540	Canola	nucleus	20.0	18.98
CDY25000	Canola	nucleus	20.0	18.98
KRG98147	Soybean	mitochondrion, nucleus	23.41	18.68
KRG98142	Soybean	nucleus	23.9	18.35
KRG98148	Soybean	nucleus	20.49	18.34
Bra018490.1-P	Field mustard	nucleus	25.85	18.28
CDX97329	Canola	nucleus	25.85	18.28
KRH66052	Soybean	mitochondrion, nucleus	20.0	18.22
Bra039404.1-P	Field mustard	nucleus	26.34	17.88
PGSC0003DMT400003073	Potato	cytosol	9.27	17.59
KRG88915	Soybean	mitochondrion, nucleus	17.56	17.39
PGSC0003DMT400090586	Potato	nucleus	19.51	17.02
PGSC0003DMT400073719	Potato	nucleus	21.46	16.86
AT1G65300.1	Thale cress	nucleus	22.44	16.55
AT1G65330.1	Thale cress	nucleus	22.44	16.49
Bra029469.1-P	Field mustard	nucleus	24.39	16.45
CDY60402	Canola	nucleus	24.39	16.45
CDY38696	Canola	nucleus	21.95	16.19
KRH72066	Soybean	mitochondrion, nucleus	16.1	16.02
PGSC0003DMT400089454	Potato	nucleus	19.02	15.92
Bra035448.1-P	Field mustard	nucleus	20.49	15.91
AT5G35120.1	Thale cress	cytosol	8.29	15.89
AT5G48670.1	Thale cress	nucleus	24.39	15.58
Bra035449.1-P	Field mustard	nucleus	20.0	15.53
AT2G28700.1	Thale cress	nucleus	23.9	14.89
PGSC0003DMT400095062	Potato	nucleus	20.49	14.89
CDY18830	Canola	nucleus	24.88	14.83
AT1G59930.1	Thale cress	cytosol	9.27	14.39
KRG88862	Soybean	nucleus	21.95	14.38
KRH30471	Soybean	nucleus	20.98	14.19
PGSC0003DMT400088489	Potato	nucleus	14.63	14.08
CDX80577	Canola	mitochondrion, nucleus	20.49	13.95
CDY71564	Canola	nucleus	22.93	13.86
CDY05207	Canola	nucleus	22.44	13.77
PGSC0003DMT400061726	Potato	nucleus	21.95	13.76
AT1G31630.1	Thale cress	mitochondrion	22.44	13.57
PGSC0003DMT400091650	Potato	nucleus	17.07	13.51
Bra020552.1-P	Field mustard	nucleus	22.44	13.49
Bra041022.1-P	Field mustard	nucleus	21.95	13.47
CDX88231	Canola	nucleus	18.05	13.41
CDY27734	Canola	nucleus	21.95	13.39
PGSC0003DMT400087890	Potato	cytosol	7.32	13.39
AT5G27960.1	Thale cress	nucleus	20.49	13.12
KRG88914	Soybean	cytosol	13.66	12.79
KRG98146	Soybean	nucleus	20.0	12.5
CDY70782	Canola	nucleus	19.51	12.38
Bra040248.1-P	Field mustard	nucleus	24.88	12.35
AT5G26650.1	Thale cress	nucleus	21.95	12.3
PGSC0003DMT400088654	Potato	nucleus	19.51	12.23
PGSC0003DMT400088008	Potato	nucleus	11.22	11.92
AT5G26580.1	Thale cress	nucleus	20.0	11.88
CDY05515	Canola	nucleus	21.46	11.67
PGSC0003DMT400090953	Potato	nucleus	19.02	11.61
PGSC0003DMT400061724	Potato	mitochondrion, nucleus	21.46	11.49
CDY05333	Canola	nucleus	20.98	11.41
PGSC0003DMT400077258	Potato	nucleus	21.46	11.28
Bra009911.1-P	Field mustard	mitochondrion, nucleus	20.0	11.26
Bra020525.1-P	Field mustard	nucleus	20.98	10.89
PGSC0003DMT400095755	Potato	nucleus	18.05	10.76
AT1G31640.1	Thale cress	mitochondrion	23.9	10.56
Bra020550.1-P	Field mustard	nucleus	19.51	10.53
CDY67043	Canola	nucleus	20.0	10.49
Bra020524.1-P	Field mustard	nucleus	18.05	10.28
CDY05514	Canola	nucleus	18.05	10.28
PGSC0003DMT400095417	Potato	cytosol	6.34	10.16
PGSC0003DMT400085256	Potato	nucleus	18.05	9.79
PGSC0003DMT400090516	Potato	nucleus	8.29	9.6
PGSC0003DMT400095426	Potato	mitochondrion	16.1	9.46
CDY05205	Canola	cytosol, mitochondrion, nucleus	5.85	7.36
PGSC0003DMT400086447	Potato	cytosol	6.34	6.77
PGSC0003DMT400085623	Potato	nucleus	6.34	6.5
Solyc07g043080.1.1	Tomato	cytosol	3.41	5.65
PGSC0003DMT400085114	Potato	cytosol, endoplasmic reticulum, nucleus	7.32	5.32
PGSC0003DMT400086919	Potato	nucleus	5.85	4.88
PGSC0003DMT400094113	Potato	cytosol	3.41	4.05
PGSC0003DMT400094378	Potato	nucleus	2.93	3.85
PGSC0003DMT400089615	Potato	cytosol	2.93	2.52
PGSC0003DMT400065010	Potato	vacuole	0.98	1.0
PGSC0003DMT400085093	Potato	extracellular, plastid, vacuole	0.98	1.0
PGSC0003DMT400061722	Potato	plastid	0.49	0.96
PGSC0003DMT400097522	Potato	cytosol, extracellular, mitochondrion, nucleus	0.49	0.85
PGSC0003DMT400091747	Potato	plastid	0.49	0.66

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A287HBS8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0046983	EnsemblPlantsGene:HORVU2Hr1G022060	EnsemblPlants:HORVU2Hr1G022060.1	InterPro:IPR002100	InterPro:IPR036879
PFAM:PF00319	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF153	SMART:SM00432	SUPFAM:SSF55455
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000B487031	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:63277454..63278069

Molecular Weight (calculated)

23042.9 Da

IEP (calculated)

10.748

GRAVY (calculated)

-0.625

Length

205 amino acids

Sequence
(BLAST)

001: SLSIFCWLSP SSPAMARKKV PLRYIGNDSA RRRRTYQTRR KNLMKKAGEL RILCNTKACV LVYDQGASVP DVVYPSHAEA AAILNRYKAT PNMVQFKKTV
101: SHEEFLTKCV AKFQYKADKL RREREDRDIR ALLHKAMLGG DLSAEEVARV GSKSGEIHKS LRERIAKTTR QPPVFQPQGP NVTGGAHMGP PPVYQAPPQQ
201: QAGWQ

Best Arabidopsis Sequence Match ( AT2G28700.1 )
(BLAST)

001: MARKKLNLTY IFNDRMRKRS FKQRREGFLK KLNDLKVLCD VNACAVVYNP FNSNPDVWPS KSEVNNIIKK FEMLPETQKK VKSVNHEEFL NLYISKVEKQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ

Arabidopsis Description

AGL46AGAMOUS-like 46 [Source:UniProtKB/TrEMBL;Acc:F4IIT6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.