Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98148 | Soybean | nucleus | 57.01 | 55.02 |
| KRG88863 | Soybean | mitochondrion, nucleus | 34.84 | 55.0 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 9.95 | 53.66 |
| KRG89836 | Soybean | nucleus | 32.13 | 47.65 |
| KRG98147 | Soybean | mitochondrion, nucleus | 53.39 | 45.91 |
| KRH33740 | Soybean | nucleus | 32.13 | 44.65 |
| CDY33537 | Canola | nucleus | 39.37 | 44.39 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 46.61 | 43.64 |
| KRG97962 | Soybean | nucleus | 46.61 | 43.1 |
| KRH30472 | Soybean | nucleus | 41.18 | 42.92 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 23.08 | 42.86 |
| KRH72060 | Soybean | nucleus | 33.03 | 42.69 |
| KRG98143 | Soybean | nucleus | 40.72 | 42.65 |
| KRH30919 | Soybean | nucleus | 46.61 | 42.56 |
| KRH30119 | Soybean | cytosol | 30.77 | 42.24 |
| KRH30476 | Soybean | nucleus | 28.51 | 42.0 |
| KRG98142 | Soybean | nucleus | 50.23 | 41.57 |
| KRH30113 | Soybean | nucleus | 32.13 | 41.52 |
| KRG98152 | Soybean | nucleus | 35.29 | 41.05 |
| Solyc01g102260.2.1 | Tomato | nucleus | 44.34 | 39.36 |
| KRG98150 | Soybean | mitochondrion, nucleus | 29.41 | 38.92 |
| KRG98149 | Soybean | nucleus | 35.75 | 37.09 |
| KRH30471 | Soybean | nucleus | 50.68 | 36.96 |
| KRH66114 | Soybean | nucleus | 31.67 | 35.35 |
| KRG88862 | Soybean | nucleus | 49.32 | 34.82 |
| KRG98146 | Soybean | nucleus | 51.13 | 34.45 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 33.94 | 32.61 |
| KRH66052 | Soybean | mitochondrion, nucleus | 33.03 | 32.44 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 32.13 | 32.13 |
| Bra018490.1-P | Field mustard | nucleus | 41.63 | 31.72 |
| CDX97329 | Canola | nucleus | 41.63 | 31.72 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 33.03 | 31.47 |
| Bra029469.1-P | Field mustard | nucleus | 42.53 | 30.92 |
| CDY60402 | Canola | nucleus | 42.53 | 30.92 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 21.72 | 30.77 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 11.76 | 30.59 |
| KXG28892 | Sorghum | nucleus | 24.89 | 29.73 |
| KRG88915 | Soybean | mitochondrion, nucleus | 27.6 | 29.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.77 | 29.18 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 24.89 | 28.95 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 25.34 | 28.72 |
| EES10067 | Sorghum | mitochondrion | 26.7 | 28.64 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 29.86 | 28.45 |
| AT5G48670.1 | Thale cress | nucleus | 41.18 | 28.35 |
| OQU83806 | Sorghum | nucleus | 22.17 | 28.0 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 30.77 | 27.76 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 24.89 | 27.64 |
| KRH72066 | Soybean | mitochondrion, nucleus | 25.34 | 27.18 |
| CDY05207 | Canola | nucleus | 40.27 | 26.65 |
| KXG28893 | Sorghum | nucleus | 19.91 | 26.19 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 21.72 | 25.95 |
| Bra041022.1-P | Field mustard | nucleus | 38.91 | 25.75 |
| Os03t0582400-01 | Rice | nucleus | 28.96 | 25.7 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 19.0 | 25.61 |
| CDY27734 | Canola | nucleus | 38.91 | 25.6 |
| OQU83804 | Sorghum | mitochondrion | 27.15 | 25.53 |
| KRG88914 | Soybean | cytosol | 24.89 | 25.11 |
| KXG28888 | Sorghum | nucleus | 28.96 | 25.1 |
| KXG28890 | Sorghum | mitochondrion | 28.96 | 25.1 |
| KXG28889 | Sorghum | nucleus | 28.05 | 24.8 |
| KXG32310 | Sorghum | nucleus | 27.15 | 24.79 |
| Zm00001d048894_P001 | Maize | mitochondrion | 27.6 | 24.7 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 19.91 | 23.91 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 29.86 | 23.74 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 19.91 | 23.4 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 19.91 | 23.04 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 23.53 | 22.91 |
| EES06917 | Sorghum | mitochondrion, nucleus | 26.7 | 22.78 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 21.72 | 22.75 |
| KXG38099 | Sorghum | plastid | 32.13 | 22.54 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 20.81 | 22.44 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 25.34 | 22.31 |
| Zm00001d016791_P001 | Maize | mitochondrion | 28.96 | 22.3 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 21.27 | 22.27 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 23.08 | 22.27 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 18.55 | 22.16 |
| TraesCS7D01G548500.1 | Wheat | plastid | 23.53 | 22.13 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 22.62 | 22.03 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 19.0 | 21.99 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 22.17 | 21.59 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 23.53 | 21.58 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 23.53 | 21.58 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 25.34 | 21.54 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 24.43 | 21.51 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 22.62 | 21.37 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 22.62 | 21.37 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 23.53 | 21.22 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 23.53 | 21.22 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 21.72 | 21.15 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 17.65 | 21.08 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 24.89 | 21.07 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 24.89 | 21.07 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 19.91 | 20.75 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 21.27 | 20.7 |
| EER91288 | Sorghum | mitochondrion, nucleus | 29.41 | 20.7 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 24.43 | 20.69 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 21.72 | 20.34 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 22.17 | 19.76 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 20.81 | 19.49 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 20.81 | 19.09 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 20.81 | 19.09 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 19.91 | 18.26 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 23.53 | 16.83 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 23.53 | 16.61 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 23.53 | 16.61 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 22.62 | 16.13 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 21.27 | 14.6 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 20.81 | 14.24 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 20.81 | 14.24 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 21.27 | 14.16 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 18.55 | 13.36 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 20.36 | 12.4 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 19.46 | 12.08 |
Protein Annotations
| EntrezGene:100816242 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02007020 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G186100 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | UniProt:I1LLX0 | InterPro:IPR002100 | InterPro:IPR036879 |
| EnsemblPlants:KRH30473 | ProteinID:KRH30473 | ProteinID:KRH30473.1 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI000233C693 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:25519423..25520088
Molecular Weight (calculated)
25344.6 Da
IEP (calculated)
7.583
GRAVY (calculated)
-0.682
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRTKVKIAF ITNDAARRAA YRKRKKGILK KMEELSTLCG IEACAIAYSP YDPEPVIWPS ELGVHHVLGK FRTMSEWEKN KKMANQESFL GHMIAKHKEQ
101: LKKLVKENKE KEMTVFMHQC LDEGRVLPDN NLTADDLNDL SSIIEQNLKD VCRRLETLNV MEKTPPHQQP PQIQSSPVLD MSANHDQKQK KFMDLLNGNE
201: DETTTVPPFE SDANLQLQIG F
101: LKKLVKENKE KEMTVFMHQC LDEGRVLPDN NLTADDLNDL SSIIEQNLKD VCRRLETLNV MEKTPPHQQP PQIQSSPVLD MSANHDQKQK KFMDLLNGNE
201: DETTTVPPFE SDANLQLQIG F
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.