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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 5
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG88862
KRG88863
KRG88914
KRG88915
KRG89836
KRG97962
KRG98142
KRG98143
KRG98146
KRG98147
KRG98148
KRG98149
KRG98150
KRG98152
KRH30113
KRH30119
KRH30471
KRH30472
KRH30473
KRH30476
KRH30919
KRH66052
KRH66114
KRH72060
KRH72066

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G60440.1 KRG88862 AT5G48670.1 15805477
AT5G60440.1 KRG88863 AT5G48670.1 15805477
AT5G60440.1 KRG88914 AT5G48670.1 15805477
AT5G60440.1 KRG88915 AT5G48670.1 15805477
AT5G60440.1 KRG89836 AT5G48670.1 15805477
AT5G60440.1 KRG97962 AT5G48670.1 15805477
AT5G60440.1 KRG98142 AT5G48670.1 15805477
AT5G60440.1 KRG98143 AT5G48670.1 15805477
AT5G60440.1 KRG98146 AT5G48670.1 15805477
AT5G60440.1 KRG98147 AT5G48670.1 15805477
AT5G60440.1 KRG98148 AT5G48670.1 15805477
AT5G60440.1 KRG98149 AT5G48670.1 15805477
AT5G60440.1 KRG98150 AT5G48670.1 15805477
AT5G60440.1 KRG98152 AT5G48670.1 15805477
AT5G60440.1 KRH30113 AT5G48670.1 15805477
AT5G60440.1 KRH30119 AT5G48670.1 15805477
AT5G60440.1 KRH30471 AT5G48670.1 15805477
AT5G60440.1 KRH30472 AT5G48670.1 15805477
AT5G60440.1 KRH30473 AT5G48670.1 15805477
AT5G60440.1 KRH30476 AT5G48670.1 15805477
AT5G60440.1 KRH30919 AT5G48670.1 15805477
AT5G60440.1 KRH66052 AT5G48670.1 15805477
AT5G60440.1 KRH66114 AT5G48670.1 15805477
AT5G60440.1 KRH72060 AT5G48670.1 15805477
AT5G60440.1 KRH72066 AT5G48670.1 15805477
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g025050.1.1 Tomato golgi, mitochondrion, nucleus, plastid 13.69 41.07
KRH22644 Soybean nucleus 32.14 38.85
VIT_01s0010g01500.t01 Wine grape nucleus 23.81 38.84
KRH32900 Soybean nucleus 33.93 32.95
KRH32901 Soybean nucleus 33.93 32.95
KRH32946 Soybean nucleus 33.93 32.95
KRH32912 Soybean nucleus 33.93 32.95
KRH32904 Soybean nucleus 33.33 32.37
KRH32909 Soybean nucleus 33.33 32.37
KRH32916 Soybean nucleus 33.33 32.37
KRH32917 Soybean nucleus 33.93 32.02
KRH32910 Soybean nucleus 33.93 32.02
KRG88448 Soybean nucleus 32.74 31.79
KRH32915 Soybean nucleus 32.74 31.79
KRH33030 Soybean nucleus 20.83 30.97
PGSC0003DMT400013136 Potato nucleus 34.52 29.44
KRH72042 Soybean extracellular 17.86 29.13
VIT_03s0088g00600.t01 Wine grape nucleus 36.9 28.97
VIT_03s0088g00550.t01 Wine grape nucleus 35.71 28.17
KRG91148 Soybean nucleus 40.48 28.1
KRH02077 Soybean nucleus 29.76 27.78
KRH71935 Soybean nucleus 29.17 27.68
VIT_03s0088g00510.t01 Wine grape nucleus 36.9 27.68
CDY69485 Canola nucleus 20.24 27.42
CDY71457 Canola nucleus 20.24 27.42
KRG91147 Soybean nucleus 38.69 27.2
KRH41505 Soybean cytosol, nucleus, plastid 25.6 26.71
KRH72149 Soybean mitochondrion 26.79 26.63
KRH35628 Soybean nucleus 38.69 26.32
KRH60217 Soybean nucleus 27.38 25.99
KRG91150 Soybean nucleus 33.93 25.22
KRG91149 Soybean mitochondrion 36.31 25.21
KRG91151 Soybean nucleus 29.17 24.5
KRH35626 Soybean nucleus 32.74 24.34
KRH32873 Soybean nucleus 30.36 23.5
KRH32908 Soybean nucleus 12.5 23.33
CDY42198 Canola nucleus 38.1 23.19
CDX95426 Canola nucleus 38.1 23.19
AT4G36590.1 Thale cress nucleus 33.33 22.58
KRH60216 Soybean nucleus 24.4 22.16
AT1G01530.1 Thale cress nucleus 32.14 21.86
KRH35627 Soybean mitochondrion 32.14 21.86
Bra038225.1-P Field mustard nucleus 33.33 21.46
KRG99424 Soybean nucleus 23.21 21.43
KRH35629 Soybean nucleus 26.79 21.33
KRH41503 Soybean nucleus 20.24 21.25
Bra022434.1-P Field mustard nucleus 35.71 21.2
KRH45604 Soybean nucleus 23.81 21.16
CDY46165 Canola nucleus 35.12 20.85
AT5G60440.1 Thale cress nucleus 36.9 20.74
CDY15761 Canola nucleus 27.38 20.63
Bra011938.1-P Field mustard nucleus 29.17 20.59
CDY04574 Canola nucleus 29.17 20.59
CDY09199 Canola nucleus 30.36 20.56
CDY24623 Canola nucleus 34.52 20.49
CDY61930 Canola nucleus 33.93 20.43
AT1G65360.1 Thale cress nucleus 27.38 20.35
Bra020242.1-P Field mustard nucleus 29.76 20.16
CDY31547 Canola nucleus 33.33 20.07
Bra002480.1-P Field mustard nucleus 33.33 20.07
KRH72146 Soybean nucleus 22.62 20.0
CDY28567 Canola mitochondrion, nucleus 28.57 19.35
CDY09204 Canola nucleus 28.57 19.28
GSMUA_Achr5P01940_001 Banana nucleus 27.98 19.26
CDY09205 Canola nucleus 31.55 18.86
Bra020247.1-P Field mustard cytosol 29.17 18.22
CDY31718 Canola nucleus 25.0 17.57
KRH06269 Soybean nucleus 25.6 16.93
GSMUA_Achr4P28260_001 Banana nucleus 24.4 16.67
KRH47706 Soybean nucleus 23.81 15.69
KRH47701 Soybean nucleus 25.6 15.14
KRH47704 Soybean nucleus 24.4 14.29
GSMUA_Achr5P01990_001 Banana nucleus 25.6 12.39
Bra035685.1-P Field mustard nucleus 21.43 12.29
Bra020246.1-P Field mustard cytosol 11.9 11.76
Bra020245.1-P Field mustard nucleus 9.52 11.43
Bra022446.1-P Field mustard cytosol 12.5 10.71
CDY51695 Canola cytosol 12.5 10.71
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10EMBL:ACUP02006738EnsemblPlantsGene:GLYMA_11G029900GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0046983InterPro:IPR002100InterPro:IPR036879UniProt:K7LMR8
EnsemblPlants:KRH28025ProteinID:KRH28025ProteinID:KRH28025.1PFAM:PF00319PRINTS:PR00404PFscan:PS50066
PANTHER:PTHR11945PANTHER:PTHR11945:SF185SMART:SM00432SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sf
UniParc:UPI00023CDAB9:::::
Description
hypothetical protein
Coordinates
chr11:-:2163387..2163935
Molecular Weight (calculated)
19489.0 Da
IEP (calculated)
10.899
GRAVY (calculated)
-0.336
Length
168 amino acids
Sequence
(BLAST)
001: MSSNLRIMKG RRKIEMKKMT NKSNLQVAFS KRRSGVFKKA SELSTLCDAE ACLIIFSPMV HRYLIEVAPH VTQFMGVNLH EFNAQLTKFT TQLETEKKRA
101: SELKRLHKVV QTQWWRATPT NEMTILQLNE FKGALQQMKI NTTRKSEMIL IHNAINPTLF FANDNFLA
Best Arabidopsis Sequence Match ( AT5G60440.1 )
(BLAST)
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.