Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41503 | Soybean | nucleus | 71.35 | 82.5 |
| KRG99424 | Soybean | nucleus | 76.76 | 78.02 |
| KRH45604 | Soybean | nucleus | 78.38 | 76.72 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 61.08 | 70.19 |
| KRH60217 | Soybean | nucleus | 67.03 | 70.06 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 23.78 | 37.61 |
| AT2G34440.1 | Thale cress | nucleus | 34.59 | 37.21 |
| AT3G66656.1 | Thale cress | nucleus | 34.05 | 35.39 |
| Bra021910.1-P | Field mustard | nucleus | 33.51 | 34.07 |
| Bra001209.1-P | Field mustard | nucleus | 31.35 | 32.4 |
| CDX74094 | Canola | nucleus | 31.35 | 32.4 |
| CDY57614 | Canola | nucleus | 31.35 | 32.4 |
| KRH22644 | Soybean | nucleus | 24.32 | 32.37 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 23.78 | 31.65 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 25.95 | 31.58 |
| KRH02077 | Soybean | nucleus | 30.27 | 31.11 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 24.86 | 30.67 |
| PGSC0003DMT400097162 | Potato | nucleus | 27.03 | 30.3 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 29.73 | 29.1 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 29.73 | 27.92 |
| KRH72042 | Soybean | extracellular | 15.14 | 27.18 |
| KRH32917 | Soybean | nucleus | 25.95 | 26.97 |
| KRH32912 | Soybean | nucleus | 24.86 | 26.59 |
| KRH32915 | Soybean | nucleus | 24.86 | 26.59 |
| KRG91151 | Soybean | nucleus | 28.65 | 26.5 |
| KRH32909 | Soybean | nucleus | 24.32 | 26.01 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 27.57 | 25.89 |
| KRH32910 | Soybean | nucleus | 24.86 | 25.84 |
| KRH33030 | Soybean | nucleus | 15.68 | 25.66 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 28.11 | 25.62 |
| KRH32946 | Soybean | nucleus | 23.78 | 25.43 |
| KRH32904 | Soybean | nucleus | 23.78 | 25.43 |
| KRH32916 | Soybean | nucleus | 23.78 | 25.43 |
| KRH32901 | Soybean | nucleus | 23.78 | 25.43 |
| KRH32900 | Soybean | nucleus | 23.78 | 25.43 |
| KRG88448 | Soybean | nucleus | 23.78 | 25.43 |
| KRH71935 | Soybean | nucleus | 24.32 | 25.42 |
| KRH35626 | Soybean | nucleus | 30.81 | 25.22 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 28.65 | 25.12 |
| KRG91150 | Soybean | nucleus | 30.27 | 24.78 |
| PGSC0003DMT400086619 | Potato | nucleus | 24.86 | 24.73 |
| KRH28025 | Soybean | nucleus | 22.16 | 24.4 |
| KRG91148 | Soybean | nucleus | 31.89 | 24.38 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 23.78 | 24.04 |
| KRH72149 | Soybean | mitochondrion | 21.62 | 23.67 |
| KRG91147 | Soybean | nucleus | 30.27 | 23.43 |
| KRH35628 | Soybean | nucleus | 30.81 | 23.08 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 30.27 | 22.95 |
| Solyc01g060300.1.1 | Tomato | nucleus | 25.95 | 22.75 |
| KRH32873 | Soybean | nucleus | 25.41 | 21.66 |
| KRG91149 | Soybean | mitochondrion | 26.49 | 20.25 |
| KRH35627 | Soybean | mitochondrion | 26.49 | 19.84 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 23.78 | 17.89 |
| KRH72146 | Soybean | nucleus | 17.84 | 17.37 |
| KRH06269 | Soybean | nucleus | 22.16 | 16.14 |
| KRH35629 | Soybean | nucleus | 18.38 | 16.11 |
| KRH47706 | Soybean | nucleus | 22.16 | 16.08 |
| KRH47701 | Soybean | nucleus | 24.32 | 15.85 |
| KRH32908 | Soybean | nucleus | 7.57 | 15.56 |
| KRH47704 | Soybean | nucleus | 23.24 | 14.98 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 27.57 | 14.7 |
| PGSC0003DMT400090145 | Potato | nucleus | 8.11 | 9.93 |
| PGSC0003DMT400086182 | Potato | cytosol | 6.49 | 9.38 |
| PGSC0003DMT400092220 | Potato | cytosol | 5.95 | 8.59 |
Protein Annotations
| EntrezGene:100791127 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02003355 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G227200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | UniProt:I1K5Y6 |
| InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KRH60216 | ProteinID:KRH60216 | ProteinID:KRH60216.1 | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF229 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233953E | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:40541538..40542404
Molecular Weight (calculated)
20821.9 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.604
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKIEIAT LKDPNTRQVT FSKRRTGLFK KANELSILCG AEIAIVVFSI GNKPYSFGHP GVDVIAAKFL QEAANSSDAK QIDAQGNNPS NELGDMNRLN
101: QQLSDVQTQI LEEEKKGAEH DERLKQHQVT QLSQYKELQA SYLELQHRVK DYVNAIEVSE CMILLAQEPV VGITKQVTTK RRKNN
101: QQLSDVQTQI LEEEKKGAEH DERLKQHQVT QLSQYKELQA SYLELQHRVK DYVNAIEVSE CMILLAQEPV VGITKQVTTK RRKNN
001: MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
Arabidopsis Description
AGL29AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.