Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45604 | Soybean | nucleus | 87.36 | 84.13 |
| KRH60216 | Soybean | nucleus | 78.02 | 76.76 |
| KRH41503 | Soybean | nucleus | 63.19 | 71.88 |
| KRH60217 | Soybean | nucleus | 67.58 | 69.49 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 59.89 | 67.7 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 24.73 | 38.46 |
| AT2G34440.1 | Thale cress | nucleus | 35.16 | 37.21 |
| KRH22644 | Soybean | nucleus | 25.27 | 33.09 |
| Bra021910.1-P | Field mustard | nucleus | 32.97 | 32.97 |
| AT3G66656.1 | Thale cress | nucleus | 31.32 | 32.02 |
| CDY57614 | Canola | nucleus | 31.32 | 31.84 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 26.37 | 31.58 |
| CDX74094 | Canola | nucleus | 30.77 | 31.28 |
| Bra001209.1-P | Field mustard | nucleus | 30.77 | 31.28 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 23.63 | 30.94 |
| PGSC0003DMT400097162 | Potato | nucleus | 27.47 | 30.3 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 24.73 | 30.0 |
| KRH32912 | Soybean | nucleus | 28.02 | 29.48 |
| KRH32915 | Soybean | nucleus | 28.02 | 29.48 |
| KRH32916 | Soybean | nucleus | 27.47 | 28.9 |
| KRH32909 | Soybean | nucleus | 27.47 | 28.9 |
| KRH32917 | Soybean | nucleus | 28.02 | 28.65 |
| KRH32910 | Soybean | nucleus | 28.02 | 28.65 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 29.67 | 28.57 |
| KRH02077 | Soybean | nucleus | 28.02 | 28.33 |
| KRH32946 | Soybean | nucleus | 26.92 | 28.32 |
| KRH32901 | Soybean | nucleus | 26.92 | 28.32 |
| KRH32904 | Soybean | nucleus | 26.92 | 28.32 |
| KRG88448 | Soybean | nucleus | 26.92 | 28.32 |
| KRH33030 | Soybean | nucleus | 17.58 | 28.32 |
| KRH72042 | Soybean | extracellular | 15.93 | 28.16 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 30.22 | 27.92 |
| KRH32900 | Soybean | nucleus | 26.37 | 27.75 |
| KRH71935 | Soybean | nucleus | 25.82 | 26.55 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 29.12 | 26.11 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 28.02 | 25.89 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 29.67 | 25.59 |
| KRH72149 | Soybean | mitochondrion | 23.63 | 25.44 |
| PGSC0003DMT400086619 | Potato | nucleus | 25.27 | 24.73 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 24.73 | 24.59 |
| KRG91151 | Soybean | nucleus | 26.92 | 24.5 |
| KRH35626 | Soybean | nucleus | 29.12 | 23.45 |
| KRH28025 | Soybean | nucleus | 21.43 | 23.21 |
| KRH32873 | Soybean | nucleus | 27.47 | 23.04 |
| KRG91150 | Soybean | nucleus | 28.57 | 23.01 |
| KRG91148 | Soybean | nucleus | 30.22 | 22.73 |
| KRH35628 | Soybean | nucleus | 30.77 | 22.67 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 30.22 | 22.54 |
| KRG91147 | Soybean | nucleus | 28.57 | 21.76 |
| Solyc01g060300.1.1 | Tomato | nucleus | 24.73 | 21.33 |
| KRH35627 | Soybean | mitochondrion | 28.02 | 20.65 |
| KRG91149 | Soybean | mitochondrion | 26.92 | 20.25 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 25.27 | 18.7 |
| KRH72146 | Soybean | nucleus | 18.68 | 17.89 |
| KRH47706 | Soybean | nucleus | 24.18 | 17.25 |
| KRH32908 | Soybean | nucleus | 8.24 | 16.67 |
| KRH47701 | Soybean | nucleus | 25.27 | 16.2 |
| KRH06269 | Soybean | nucleus | 22.53 | 16.14 |
| KRH47704 | Soybean | nucleus | 25.27 | 16.03 |
| KRH35629 | Soybean | nucleus | 18.13 | 15.64 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 26.37 | 13.83 |
| PGSC0003DMT400086182 | Potato | cytosol | 7.14 | 10.16 |
| PGSC0003DMT400090145 | Potato | nucleus | 8.24 | 9.93 |
| PGSC0003DMT400092220 | Potato | cytosol | 6.59 | 9.38 |
Protein Annotations
| EntrezGene:100784161 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02011058 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G143800 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | UniProt:I1N1K6 |
| InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KRG99424 | ProteinID:KRG99424 | ProteinID:KRG99424.1 | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF229 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233EC71 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:23164282..23164830
Molecular Weight (calculated)
20724.1 Da
IEP (calculated)
9.183
GRAVY (calculated)
-0.461
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKIQIAV VKDPNTRQVT FSKRRTGLFK KANELSILCG VEIAIVVFSI GNKPYSFGHP SVDVVVTKFL QHATNSNDAL GSNNSSNEVV GDMERLNQQL
101: SDLQTQILEE EIKGTKHDER LKQHEVTQVF QYKELQGLCL ELQRKVKDYV DEIEVSECML LLAQEPVVGV RKEVITKKRR KN
101: SDLQTQILEE EIKGTKHDER LKQHEVTQVF QYKELQGLCL ELQRKVKDYV DEIEVSECML LLAQEPVVGV RKEVITKKRR KN
001: MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
Arabidopsis Description
AGL29AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.