Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001209.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY57614 | Canola | nucleus | 97.77 | 97.77 |
| AT3G66656.1 | Thale cress | nucleus | 68.72 | 69.1 |
| CDY36151 | Canola | nucleus | 23.46 | 47.73 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 30.17 | 35.53 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 31.84 | 35.4 |
| KRH60217 | Soybean | nucleus | 33.52 | 33.9 |
| KRH41503 | Soybean | nucleus | 28.49 | 31.88 |
| KRH45604 | Soybean | nucleus | 33.52 | 31.75 |
| PGSC0003DMT400097162 | Potato | nucleus | 29.05 | 31.52 |
| CDX81713 | Canola | nucleus | 28.49 | 31.48 |
| CDY71457 | Canola | nucleus | 21.79 | 31.45 |
| CDY69485 | Canola | nucleus | 21.79 | 31.45 |
| KRH60216 | Soybean | nucleus | 32.4 | 31.35 |
| KRG99424 | Soybean | nucleus | 31.28 | 30.77 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 25.7 | 30.67 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 19.55 | 29.91 |
| CDY55987 | Canola | nucleus | 27.93 | 29.76 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 21.79 | 28.06 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 29.05 | 27.51 |
| PGSC0003DMT400086619 | Potato | nucleus | 27.93 | 26.88 |
| CDY26304 | Canola | nucleus | 27.37 | 26.49 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 29.05 | 26.4 |
| CDX99867 | Canola | nucleus | 28.49 | 26.29 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 29.61 | 26.11 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 26.82 | 24.37 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 24.58 | 24.04 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 27.93 | 23.7 |
| CDY28567 | Canola | mitochondrion, nucleus | 29.61 | 21.37 |
| CDY09199 | Canola | nucleus | 29.61 | 21.37 |
| CDY09204 | Canola | nucleus | 29.61 | 21.29 |
| CDY42198 | Canola | nucleus | 32.4 | 21.01 |
| CDX95426 | Canola | nucleus | 32.4 | 21.01 |
| CDY24623 | Canola | nucleus | 32.96 | 20.85 |
| CDY46165 | Canola | nucleus | 31.84 | 20.14 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 27.37 | 20.08 |
| CDY09205 | Canola | nucleus | 31.28 | 19.93 |
| Solyc01g060300.1.1 | Tomato | nucleus | 23.46 | 19.91 |
| CDY31547 | Canola | nucleus | 30.73 | 19.71 |
| CDY61930 | Canola | nucleus | 30.17 | 19.35 |
| CDX72908 | Canola | nucleus | 22.91 | 19.25 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 22.35 | 18.87 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 22.35 | 18.87 |
| CDX81816 | Canola | nucleus | 21.23 | 18.45 |
| CDY21751 | Canola | nucleus | 21.23 | 18.45 |
| CDY04574 | Canola | nucleus | 24.02 | 18.07 |
| CDY15761 | Canola | nucleus | 22.35 | 17.94 |
| CDY31718 | Canola | nucleus | 23.46 | 17.57 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 22.91 | 16.67 |
| PGSC0003DMT400086182 | Potato | cytosol | 10.61 | 14.84 |
| PGSC0003DMT400092220 | Potato | cytosol | 9.5 | 13.28 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 25.14 | 12.97 |
| CDY51695 | Canola | cytosol | 11.73 | 10.71 |
| PGSC0003DMT400090145 | Potato | nucleus | 8.94 | 10.6 |
| CDY34751 | Canola | cytosol | 5.03 | 7.96 |
| CDX76788 | Canola | cytosol | 5.03 | 7.96 |
| CDY36150 | Canola | cytosol | 2.23 | 6.9 |
| CDY45604 | Canola | cytosol | 2.23 | 6.9 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078CD43 | EnsemblPlants:CDX74094 | ProteinID:CDX74094 | ProteinID:CDX74094.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00111848001 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
| PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00025403F3 | SEG:seg | : |
Description
BnaA03g29530D
Coordinates
chrLK031800:+:1280023..1280562
Molecular Weight (calculated)
20331.0 Da
IEP (calculated)
4.920
GRAVY (calculated)
-0.921
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKIKMEK VQDTNTKQVT FSKRRLGLFK KAGELATLCN AEVGIMVFSP GNKPYPYGSP SFELVAERYN NESEDSDSCE TSGNGRGNRA RQEKRICKRL
101: NSIMEQVEAE KKRGEDFEHQ LETAGGEERF DKPIEELSLE ELEEYEGKMM DMLDNIQGNI SGMEVSSTLV IMSKDTQNK
101: NSIMEQVEAE KKRGEDFEHQ LETAGGEERF DKPIEELSLE ELEEYEGKMM DMLDNIQGNI SGMEVSSTLV IMSKDTQNK
001: MGRRKIKMEK VQDTNTKQVT FSKRRLGLFK KASELATLCN AEVGIVVFSP GNKPYSFGKP NFDVIAERFK NEFEEEEEGD SCETSGYSRG NRARQEKKIC
101: KRLNSITEEA EAEKKHGEDL HKWLESAEQD KFNKPIEELT LEELKEFEAK IKKISCGIQS NISHMQASSS LMFLSNDN
101: KRLNSITEEA EAEKKHGEDL HKWLESAEQD KFNKPIEELT LEELKEFEAK IKKISCGIQS NISHMQASSS LMFLSNDN
Arabidopsis Description
AGL91AGAMOUS-like 91 [Source:UniProtKB/TrEMBL;Acc:Q9C836]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.