Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400090145 | Potato | nucleus | 67.77 | 94.7 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 51.66 | 93.16 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 64.93 | 74.86 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 65.4 | 70.05 |
| PGSC0003DMT400086182 | Potato | cytosol | 40.28 | 66.41 |
| PGSC0003DMT400097162 | Potato | nucleus | 51.66 | 66.06 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 61.61 | 65.99 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 46.92 | 65.13 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 57.82 | 64.55 |
| PGSC0003DMT400086619 | Potato | nucleus | 56.87 | 64.52 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 43.6 | 61.33 |
| PGSC0003DMT400092220 | Potato | cytosol | 36.97 | 60.94 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 31.75 | 48.2 |
| PGSC0003DMT400094942 | Potato | nucleus | 27.49 | 44.27 |
| PGSC0003DMT400091054 | Potato | plastid | 23.22 | 42.98 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 24.64 | 42.62 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 32.7 | 41.57 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 30.81 | 38.69 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 32.23 | 38.64 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 30.33 | 38.32 |
| Solyc01g060300.1.1 | Tomato | nucleus | 35.07 | 35.07 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 25.12 | 32.92 |
| PGSC0003DMT400086435 | Potato | nucleus | 16.11 | 32.38 |
| PGSC0003DMT400094062 | Potato | nucleus | 31.28 | 32.35 |
| PGSC0003DMT400095852 | Potato | cytosol | 22.27 | 31.97 |
| AT3G66656.1 | Thale cress | nucleus | 26.54 | 31.46 |
| PGSC0003DMT400085261 | Potato | nucleus | 24.17 | 31.1 |
| KRH60217 | Soybean | nucleus | 25.59 | 30.51 |
| PGSC0003DMT400013136 | Potato | nucleus | 28.44 | 30.46 |
| KRG99424 | Soybean | nucleus | 25.59 | 29.67 |
| Bra021910.1-P | Field mustard | nucleus | 25.59 | 29.67 |
| PGSC0003DMT400002920 | Potato | nucleus | 24.64 | 29.55 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 30.81 | 29.41 |
| KRH45604 | Soybean | nucleus | 26.07 | 29.1 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 27.96 | 29.06 |
| PGSC0003DMT400000210 | Potato | nucleus | 19.43 | 28.67 |
| KRH60216 | Soybean | nucleus | 25.12 | 28.65 |
| AT2G34440.1 | Thale cress | nucleus | 23.22 | 28.49 |
| Bra001209.1-P | Field mustard | nucleus | 23.7 | 27.93 |
| CDX74094 | Canola | nucleus | 23.7 | 27.93 |
| CDY57614 | Canola | nucleus | 23.7 | 27.93 |
| KRH41503 | Soybean | nucleus | 20.85 | 27.5 |
| PGSC0003DMT400093647 | Potato | nucleus | 17.06 | 25.0 |
| PGSC0003DMT400088968 | Potato | nucleus | 12.8 | 24.55 |
| PGSC0003DMT400090024 | Potato | nucleus | 19.43 | 23.98 |
| PGSC0003DMT400095957 | Potato | cytosol | 14.22 | 23.26 |
| PGSC0003DMT400088611 | Potato | nucleus | 18.01 | 23.03 |
| PGSC0003DMT400013105 | Potato | nucleus | 23.22 | 23.0 |
| PGSC0003DMT400092448 | Potato | plastid | 24.17 | 22.67 |
| PGSC0003DMT400063794 | Potato | plastid | 24.64 | 22.51 |
| PGSC0003DMT400092871 | Potato | nucleus | 14.69 | 22.14 |
| PGSC0003DMT400093319 | Potato | nucleus | 18.48 | 21.91 |
| PGSC0003DMT400095190 | Potato | nucleus | 18.48 | 21.67 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 25.12 | 21.54 |
| PGSC0003DMT400095980 | Potato | nucleus | 17.54 | 21.39 |
| PGSC0003DMT400090103 | Potato | nucleus | 18.01 | 21.35 |
| PGSC0003DMT400089966 | Potato | cytosol | 17.06 | 21.18 |
| PGSC0003DMT400089582 | Potato | cytosol | 16.11 | 21.12 |
| PGSC0003DMT400091277 | Potato | nucleus | 18.01 | 21.11 |
| PGSC0003DMT400088010 | Potato | cytosol | 15.64 | 20.5 |
| PGSC0003DMT400090655 | Potato | cytosol | 16.59 | 20.11 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 23.22 | 20.08 |
| PGSC0003DMT400094886 | Potato | nucleus | 17.06 | 20.0 |
| PGSC0003DMT400093117 | Potato | nucleus | 17.06 | 20.0 |
| PGSC0003DMT400094043 | Potato | cytosol | 13.74 | 19.46 |
| PGSC0003DMT400087813 | Potato | nucleus | 16.59 | 19.23 |
| PGSC0003DMT400091428 | Potato | nucleus | 14.69 | 18.02 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 23.7 | 14.41 |
| PGSC0003DMT400095917 | Potato | cytosol | 9.0 | 14.39 |
| PGSC0003DMT400097360 | Potato | cytosol | 9.0 | 14.39 |
| PGSC0003DMT400097679 | Potato | cytosol | 8.53 | 14.06 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 6.16 | 12.62 |
| PGSC0003DMT400027289 | Potato | cytosol | 7.58 | 12.4 |
Protein Annotations
| EntrezGene:102580558 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | UniProt:M1DU30 | InterPro:MADS_MEF2-like | PFAM:PF00319 | EnsemblPlantsGene:PGSC0003DMG400043978 | PGSC:PGSC0003DMG400043978 |
| EnsemblPlants:PGSC0003DMT400094407 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002952010 | RefSeq:XP_006340409.1 | SEG:seg |
Description
Mads box protein [Source:PGSC_GENE;Acc:PGSC0003DMG400043978]
Coordinates
chr11:+:41767865..41768500
Molecular Weight (calculated)
23682.7 Da
IEP (calculated)
5.439
GRAVY (calculated)
-0.711
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGLNCRRRI TIARVQNSRN RQVTFSKRRN GLFKKASELC TLCGAYVAVV IFSSRNKIYS CGHPSVEFIV DKFLGENPQP DTNASNPDTD APNPNTDAPN
101: PIVVTHQNAY VDEINKKLNK LENSLEREKK YGEALQSLRN ELPYEKIDFL NLKKLSEALE AADEEVERVA SQLREGDIEF PYQIIGSALA PLRVEENNSS
201: DPDEGSSGSH E
101: PIVVTHQNAY VDEINKKLNK LENSLEREKK YGEALQSLRN ELPYEKIDFL NLKKLSEALE AADEEVERVA SQLREGDIEF PYQIIGSALA PLRVEENNSS
201: DPDEGSSGSH E
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.