Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400095852 | Potato | cytosol | 35.56 | 54.42 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 39.56 | 53.61 |
| PGSC0003DMT400094942 | Potato | nucleus | 30.22 | 51.91 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 37.33 | 50.3 |
| PGSC0003DMT400085261 | Potato | nucleus | 35.56 | 48.78 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 37.78 | 48.3 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 35.56 | 47.62 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 24.89 | 45.9 |
| PGSC0003DMT400091054 | Potato | plastid | 20.44 | 40.35 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 22.22 | 32.89 |
| PGSC0003DMT400097162 | Potato | nucleus | 23.56 | 32.12 |
| VIT_01s0010g01530.t01 | Wine grape | nucleus | 24.89 | 28.87 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 18.67 | 28.0 |
| PGSC0003DMT400086182 | Potato | cytosol | 15.56 | 27.34 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 23.56 | 26.9 |
| PGSC0003DMT400013136 | Potato | nucleus | 23.56 | 26.9 |
| PGSC0003DMT400086619 | Potato | nucleus | 21.78 | 26.34 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 25.33 | 25.79 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 22.22 | 25.38 |
| PGSC0003DMT400092220 | Potato | cytosol | 14.22 | 25.0 |
| PGSC0003DMT400094062 | Potato | nucleus | 22.22 | 24.51 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 22.67 | 24.17 |
| PGSC0003DMT400095957 | Potato | cytosol | 13.78 | 24.03 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 12.44 | 23.93 |
| PGSC0003DMT400095190 | Potato | nucleus | 19.11 | 23.89 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 20.0 | 23.81 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 18.67 | 22.95 |
| PGSC0003DMT400093117 | Potato | nucleus | 18.22 | 22.78 |
| PGSC0003DMT400091428 | Potato | nucleus | 17.33 | 22.67 |
| PGSC0003DMT400093319 | Potato | nucleus | 17.78 | 22.47 |
| PGSC0003DMT400090103 | Potato | nucleus | 17.78 | 22.47 |
| PGSC0003DMT400091277 | Potato | nucleus | 17.78 | 22.22 |
| PGSC0003DMT400094886 | Potato | nucleus | 17.33 | 21.67 |
| PGSC0003DMT400090145 | Potato | nucleus | 14.22 | 21.19 |
| PGSC0003DMT400089966 | Potato | cytosol | 16.0 | 21.18 |
| PGSC0003DMT400090024 | Potato | nucleus | 16.0 | 21.05 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 22.67 | 20.9 |
| PGSC0003DMT400088611 | Potato | nucleus | 15.11 | 20.61 |
| PGSC0003DMT400097679 | Potato | cytosol | 11.56 | 20.31 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 21.78 | 19.92 |
| PGSC0003DMT400000210 | Potato | nucleus | 12.44 | 19.58 |
| PGSC0003DMT400088010 | Potato | cytosol | 13.78 | 19.25 |
| PGSC0003DMT400013105 | Potato | nucleus | 18.22 | 19.25 |
| PGSC0003DMT400086435 | Potato | nucleus | 8.89 | 19.05 |
| PGSC0003DMT400093647 | Potato | nucleus | 12.0 | 18.75 |
| PGSC0003DMT400002920 | Potato | nucleus | 14.67 | 18.75 |
| PGSC0003DMT400089582 | Potato | cytosol | 13.33 | 18.63 |
| PGSC0003DMT400095980 | Potato | nucleus | 14.22 | 18.5 |
| PGSC0003DMT400097360 | Potato | cytosol | 10.67 | 18.18 |
| PGSC0003DMT400095917 | Potato | cytosol | 10.67 | 18.18 |
| PGSC0003DMT400087813 | Potato | nucleus | 14.67 | 18.13 |
| PGSC0003DMT400092871 | Potato | nucleus | 11.11 | 17.86 |
| PGSC0003DMT400090655 | Potato | cytosol | 13.78 | 17.82 |
| PGSC0003DMT400063794 | Potato | plastid | 18.22 | 17.75 |
| PGSC0003DMT400094043 | Potato | cytosol | 11.56 | 17.45 |
| PGSC0003DMT400027289 | Potato | cytosol | 9.78 | 17.05 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 25.33 | 16.43 |
| PGSC0003DMT400088968 | Potato | nucleus | 7.56 | 15.45 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 4.89 | 10.68 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400092448 | EnsemblPlantsGene:PGSC0003DMG400042019 | ncoils:Coil | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | PGSC:PGSC0003DMG400042019 |
| UniParc:UPI0002952758 | UniProt:M1DPU0 | MapMan:35.2 | : | : | : |
Description
Mads box protein [Source:PGSC_GENE;Acc:PGSC0003DMG400042019]
Coordinates
chr4:-:27601405..27606870
Molecular Weight (calculated)
25462.1 Da
IEP (calculated)
10.208
GRAVY (calculated)
-0.348
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDAGAGLLP PKRGSCSGVR TAIAGPMRLK VVNKPQNVFI LHSSTLRAKE RPQTTYWPFF TILKDKDWLP RFGITNLDRL PHCGMIMGSV AISGIIIESD
101: TTFRVDTLVD RFLGRNLPPP NNDVHNQQIV DLRKASICEL NTKLMNLEGV LQMEKNRGES LREIRKRADG VWWESPMEEL NLFQLQHLKK ALEILKKKVE
201: KEAQMVNNNA FPFLGSAWTP PNCAS
101: TTFRVDTLVD RFLGRNLPPP NNDVHNQQIV DLRKASICEL NTKLMNLEGV LQMEKNRGES LREIRKRADG VWWESPMEEL NLFQLQHLKK ALEILKKKVE
201: KEAQMVNNNA FPFLGSAWTP PNCAS
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.