Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086182 | Potato | cytosol | 85.94 | 85.94 |
| PGSC0003DMT400086619 | Potato | nucleus | 82.03 | 56.45 |
| PGSC0003DMT400090145 | Potato | nucleus | 60.16 | 50.99 |
| PGSC0003DMT400097162 | Potato | nucleus | 63.28 | 49.09 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 57.81 | 48.68 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 61.72 | 40.1 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 46.09 | 39.33 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 58.59 | 38.07 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 54.69 | 37.04 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 60.94 | 36.97 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 52.34 | 36.61 |
| PGSC0003DMT400095852 | Potato | cytosol | 25.0 | 21.77 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 25.0 | 19.28 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 23.44 | 17.86 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 24.22 | 17.61 |
| PGSC0003DMT400094942 | Potato | nucleus | 17.97 | 17.56 |
| PGSC0003DMT400085261 | Potato | nucleus | 21.88 | 17.07 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 21.09 | 16.17 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 14.06 | 14.75 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 13.28 | 14.53 |
| PGSC0003DMT400092448 | Potato | plastid | 25.0 | 14.22 |
| PGSC0003DMT400094062 | Potato | nucleus | 22.66 | 14.22 |
| PGSC0003DMT400013136 | Potato | nucleus | 20.31 | 13.2 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 18.75 | 11.82 |
| PGSC0003DMT400089582 | Potato | cytosol | 14.84 | 11.8 |
| PGSC0003DMT400088010 | Potato | cytosol | 14.84 | 11.8 |
| AT3G66656.1 | Thale cress | nucleus | 16.41 | 11.8 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 20.31 | 11.76 |
| Bra021910.1-P | Field mustard | nucleus | 16.41 | 11.54 |
| PGSC0003DMT400091054 | Potato | plastid | 10.16 | 11.4 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 11.72 | 10.79 |
| PGSC0003DMT400093647 | Potato | nucleus | 11.72 | 10.42 |
| PGSC0003DMT400090655 | Potato | cytosol | 14.06 | 10.34 |
| PGSC0003DMT400002920 | Potato | nucleus | 14.06 | 10.23 |
| PGSC0003DMT400090103 | Potato | nucleus | 14.06 | 10.11 |
| PGSC0003DMT400094043 | Potato | cytosol | 11.72 | 10.07 |
| AT2G34440.1 | Thale cress | nucleus | 13.28 | 9.88 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 7.81 | 9.71 |
| Bra001209.1-P | Field mustard | nucleus | 13.28 | 9.5 |
| CDY57614 | Canola | nucleus | 13.28 | 9.5 |
| CDX74094 | Canola | nucleus | 13.28 | 9.5 |
| PGSC0003DMT400088611 | Potato | nucleus | 11.72 | 9.09 |
| PGSC0003DMT400097360 | Potato | cytosol | 9.38 | 9.09 |
| PGSC0003DMT400095917 | Potato | cytosol | 9.38 | 9.09 |
| PGSC0003DMT400093319 | Potato | nucleus | 12.5 | 8.99 |
| PGSC0003DMT400091277 | Potato | nucleus | 12.5 | 8.89 |
| PGSC0003DMT400089966 | Potato | cytosol | 11.72 | 8.82 |
| Solyc01g060300.1.1 | Tomato | nucleus | 14.06 | 8.53 |
| PGSC0003DMT400095957 | Potato | cytosol | 8.59 | 8.53 |
| PGSC0003DMT400095980 | Potato | nucleus | 10.94 | 8.09 |
| PGSC0003DMT400094886 | Potato | nucleus | 10.94 | 7.78 |
| PGSC0003DMT400000210 | Potato | nucleus | 8.59 | 7.69 |
| PGSC0003DMT400091428 | Potato | nucleus | 10.16 | 7.56 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 9.38 | 7.45 |
| KRH60217 | Soybean | nucleus | 10.16 | 7.34 |
| PGSC0003DMT400013105 | Potato | nucleus | 11.72 | 7.04 |
| PGSC0003DMT400097679 | Potato | cytosol | 7.03 | 7.03 |
| PGSC0003DMT400027289 | Potato | cytosol | 7.03 | 6.98 |
| PGSC0003DMT400093117 | Potato | nucleus | 9.38 | 6.67 |
| KRG99424 | Soybean | nucleus | 9.38 | 6.59 |
| PGSC0003DMT400087813 | Potato | nucleus | 9.38 | 6.59 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 12.5 | 6.56 |
| PGSC0003DMT400088968 | Potato | nucleus | 5.47 | 6.36 |
| KRH45604 | Soybean | nucleus | 9.38 | 6.35 |
| PGSC0003DMT400095190 | Potato | nucleus | 8.59 | 6.11 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 11.72 | 6.1 |
| PGSC0003DMT400063794 | Potato | plastid | 10.94 | 6.06 |
| KRH60216 | Soybean | nucleus | 8.59 | 5.95 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 14.84 | 5.48 |
| PGSC0003DMT400090024 | Potato | nucleus | 7.03 | 5.26 |
| PGSC0003DMT400092871 | Potato | nucleus | 5.47 | 5.0 |
| KRH41503 | Soybean | nucleus | 4.69 | 3.75 |
| PGSC0003DMT400086435 | Potato | nucleus | 0.78 | 0.95 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400092220 | EnsemblPlantsGene:PGSC0003DMG400041791 | PGSC:PGSC0003DMG400041791 | UniParc:UPI000296C86A | UniProt:M1DPC4 | MapMan:35.2 |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400041791]
Coordinates
chr11:+:36102620..36103006
Molecular Weight (calculated)
14603.2 Da
IEP (calculated)
4.838
GRAVY (calculated)
-0.634
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRFLGENPL TDTNAPNPIF IAHQNANTDE INRKLNRLKI SLERENKYGE ALQASRKEPP IEKLISFDLK NMCKALEVAD EEIERVLSIK KECGFEFPYQ
101: TIGSPFAPLR VIEHFSSDSY EGPSGFNE
101: TIGSPFAPLR VIEHFSSDSY EGPSGFNE
001: MGSSGDVNWK LADHPKLPKG KTIGLIVLDG WGESDPDQYN CIHKAPTPAM DSLKDGKPDT WRLIKAHGTA VGLPSEDDMG NSEVGHNALG AGRIYAQGAK
101: LVDLALASGK IYEDEGFKYI SQSFEKGTVH LIGLLSDGGV HSRLDQVQLL LKGFAERGAK RIRVHILTDG RDVLDGSSVG FVETLEADLA ALRAKGVDAQ
201: VASGGGRMYV TMDRYENDWS VVKRGWDAQV LGEAPHKFKS ALEAVKTLRA EPGANDQYLP SFVIVDDNGK AVGPIVDGDA VVTFNFRADR MVMHAKALEY
301: KDFDKFDRVR VPDIRYAGML QYDGELKLPS RYLVSPPLID RTSGEYLAHN GVRTFACSET VKFGHVTFFW NGNRSGYFNE KLEEYVEIPS DSGISFNVQP
401: KMKALEIAEK ARDAILSGKF DQVRVNLPNG DMVGHTGDIE ATVVACEAAD RAVRTILDAI EQVGGIYVVT ADHGNAEDMV KRDKSGKPAL DKEGNLQILT
501: SHTLKPVPIA IGGPGLSAGV RFRQDIETPG LANVAATVMN LHGFVAPSDY ETSLIEVVEK
101: LVDLALASGK IYEDEGFKYI SQSFEKGTVH LIGLLSDGGV HSRLDQVQLL LKGFAERGAK RIRVHILTDG RDVLDGSSVG FVETLEADLA ALRAKGVDAQ
201: VASGGGRMYV TMDRYENDWS VVKRGWDAQV LGEAPHKFKS ALEAVKTLRA EPGANDQYLP SFVIVDDNGK AVGPIVDGDA VVTFNFRADR MVMHAKALEY
301: KDFDKFDRVR VPDIRYAGML QYDGELKLPS RYLVSPPLID RTSGEYLAHN GVRTFACSET VKFGHVTFFW NGNRSGYFNE KLEEYVEIPS DSGISFNVQP
401: KMKALEIAEK ARDAILSGKF DQVRVNLPNG DMVGHTGDIE ATVVACEAAD RAVRTILDAI EQVGGIYVVT ADHGNAEDMV KRDKSGKPAL DKEGNLQILT
501: SHTLKPVPIA IGGPGLSAGV RFRQDIETPG LANVAATVMN LHGFVAPSDY ETSLIEVVEK
Arabidopsis Description
IPGAM2 [Source:UniProtKB/TrEMBL;Acc:A0A178VFA2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.