Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
24351685
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g033930.1.1 | Tomato | cytosol | 75.73 | 78.0 |
| Solyc03g033900.1.1 | Tomato | nucleus | 77.67 | 43.72 |
| Solyc03g033880.1.1 | Tomato | cytosol | 77.67 | 43.48 |
| Solyc03g033940.1.1 | Tomato | nucleus | 78.64 | 43.09 |
| PGSC0003DMT400087813 | Potato | nucleus | 63.11 | 35.71 |
| PGSC0003DMT400097360 | Potato | cytosol | 41.75 | 32.58 |
| Solyc03g033890.1.1 | Tomato | nucleus | 42.72 | 31.43 |
| PGSC0003DMT400095917 | Potato | cytosol | 39.81 | 31.06 |
| PGSC0003DMT400027289 | Potato | cytosol | 33.98 | 27.13 |
| PGSC0003DMT400097679 | Potato | cytosol | 33.01 | 26.56 |
| PGSC0003DMT400092871 | Potato | nucleus | 32.04 | 23.57 |
| PGSC0003DMT400091277 | Potato | nucleus | 40.78 | 23.33 |
| PGSC0003DMT400094043 | Potato | cytosol | 32.04 | 22.15 |
| PGSC0003DMT400093117 | Potato | nucleus | 37.86 | 21.67 |
| PGSC0003DMT400094886 | Potato | nucleus | 37.86 | 21.67 |
| PGSC0003DMT400095190 | Potato | nucleus | 37.86 | 21.67 |
| PGSC0003DMT400088010 | Potato | cytosol | 31.07 | 19.88 |
| PGSC0003DMT400089582 | Potato | cytosol | 30.1 | 19.25 |
| PGSC0003DMT400088611 | Potato | nucleus | 30.1 | 18.79 |
| PGSC0003DMT400093319 | Potato | nucleus | 31.07 | 17.98 |
| PGSC0003DMT400095980 | Potato | nucleus | 30.1 | 17.92 |
| PGSC0003DMT400091428 | Potato | nucleus | 28.16 | 16.86 |
| PGSC0003DMT400090655 | Potato | cytosol | 28.16 | 16.67 |
| PGSC0003DMT400090103 | Potato | nucleus | 28.16 | 16.29 |
| PGSC0003DMT400093647 | Potato | nucleus | 20.39 | 14.58 |
| PGSC0003DMT400089966 | Potato | cytosol | 23.3 | 14.12 |
| PGSC0003DMT400088968 | Potato | nucleus | 13.59 | 12.73 |
| PGSC0003DMT400013136 | Potato | nucleus | 17.48 | 9.14 |
| PGSC0003DMT400090145 | Potato | nucleus | 12.62 | 8.61 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 18.45 | 8.6 |
| PGSC0003DMT400095957 | Potato | cytosol | 10.68 | 8.53 |
| AT1G54760.1 | Thale cress | nucleus | 12.62 | 8.07 |
| PGSC0003DMT400094062 | Potato | nucleus | 15.53 | 7.84 |
| PGSC0003DMT400086182 | Potato | cytosol | 9.71 | 7.81 |
| PGSC0003DMT400092220 | Potato | cytosol | 9.71 | 7.81 |
| PGSC0003DMT400063794 | Potato | plastid | 17.48 | 7.79 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 13.59 | 7.65 |
| PGSC0003DMT400095852 | Potato | cytosol | 10.68 | 7.48 |
| PGSC0003DMT400094942 | Potato | nucleus | 8.74 | 6.87 |
| PGSC0003DMT400002920 | Potato | nucleus | 11.65 | 6.82 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 10.68 | 6.63 |
| PGSC0003DMT400013105 | Potato | nucleus | 13.59 | 6.57 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 10.68 | 6.25 |
| CDX99867 | Canola | nucleus | 11.65 | 6.19 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 12.62 | 6.16 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 14.56 | 6.15 |
| PGSC0003DMT400085261 | Potato | nucleus | 9.71 | 6.1 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 8.74 | 6.0 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 9.71 | 5.99 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 13.59 | 5.69 |
| AT1G28460.1 | Thale cress | nucleus | 9.71 | 5.49 |
| PGSC0003DMT400097162 | Potato | nucleus | 8.74 | 5.45 |
| AT1G28450.1 | Thale cress | nucleus | 9.71 | 5.41 |
| AT1G29962.1 | Thale cress | nucleus | 9.71 | 5.41 |
| PGSC0003DMT400086619 | Potato | nucleus | 9.71 | 5.38 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 8.74 | 5.36 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 7.77 | 5.26 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 5.83 | 4.92 |
| PGSC0003DMT400092448 | Potato | plastid | 10.68 | 4.89 |
| CDY26304 | Canola | nucleus | 8.74 | 4.86 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 8.74 | 4.76 |
| PGSC0003DMT400091054 | Potato | plastid | 4.85 | 4.39 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 14.56 | 4.32 |
| Bra032347.1-P | Field mustard | nucleus | 7.77 | 4.3 |
| PGSC0003DMT400000210 | Potato | nucleus | 5.83 | 4.2 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 7.77 | 4.06 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 6.8 | 3.55 |
| PGSC0003DMT400090024 | Potato | nucleus | 4.85 | 2.92 |
| PGSC0003DMT400086435 | Potato | nucleus | 2.91 | 2.86 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 1.94 | 1.71 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400086349 | EnsemblPlantsGene:PGSC0003DMG400035920 | ncoils:Coil | PGSC:PGSC0003DMG400035920 | SEG:seg | UniParc:UPI0002962514 |
| UniProt:M1DBJ6 | MapMan:35.2 | : | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400035920]
Coordinates
chr3:-:4170484..4170795
Molecular Weight (calculated)
11803.9 Da
IEP (calculated)
4.318
GRAVY (calculated)
-0.663
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDLGTRLV AENARNIAIQ NNIRLNELDA REAAAKEKIR SLKQMDETRD KCWWEFVDQI NAENITTFET KLNSIEGILN DQLKKLEIET SSSLQAPLEN
101: ADN
101: ADN
001: MSASTVSITA SPRTIRRTPV LSGEKKSNFD FPPSESHANA AIGESSAGTN KDLIRAEAAG ERSNTYDVGP VTRKSGSTAT GTNTTTTQRR TRKSQGNKID
101: RGKWKTVVRV FAKQFGALLL LVGLIQLIRK LTLKDSSLSS SNFPIETEMV LSELESRISA VDGLVKTTTK MMQVQVEFLD KKMDSESRAL RQTIDSTSSV
201: LHSELKKVES KTERLQVSVD ELNAKPLVSR EELERVYEEL KKGKVGDSDV NIDKLRAYAR DIVEKEIGKH VADGLGRVDY ALASGGAFVM GHSDPFLVGN
301: GRNWFGTSRR RVHSKAVKML TPSFGEPGQC FPLKGSNGYV LVRLRAPIIP EAVTLEHVSK AVAYDRSSAP KDCRVSGWLG DIDMETETMP LLTEFSYDLD
401: RSNAQTFDIA DSAHSGLVNT VRLDFNSNHG SSSHTCIYRF RVHGRELDSV SVAHA
101: RGKWKTVVRV FAKQFGALLL LVGLIQLIRK LTLKDSSLSS SNFPIETEMV LSELESRISA VDGLVKTTTK MMQVQVEFLD KKMDSESRAL RQTIDSTSSV
201: LHSELKKVES KTERLQVSVD ELNAKPLVSR EELERVYEEL KKGKVGDSDV NIDKLRAYAR DIVEKEIGKH VADGLGRVDY ALASGGAFVM GHSDPFLVGN
301: GRNWFGTSRR RVHSKAVKML TPSFGEPGQC FPLKGSNGYV LVRLRAPIIP EAVTLEHVSK AVAYDRSSAP KDCRVSGWLG DIDMETETMP LLTEFSYDLD
401: RSNAQTFDIA DSAHSGLVNT VRLDFNSNHG SSSHTCIYRF RVHGRELDSV SVAHA
Arabidopsis Description
SUN2SUN domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG79]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.