Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G29962.1 | Thale cress | nucleus | 75.16 | 65.41 |
| AT1G28460.1 | Thale cress | nucleus | 69.57 | 61.54 |
| AT1G28450.1 | Thale cress | nucleus | 70.19 | 61.08 |
| CDX99867 | Canola | nucleus | 47.2 | 39.18 |
| Bra032347.1-P | Field mustard | nucleus | 41.61 | 36.02 |
| CDY26304 | Canola | nucleus | 40.99 | 35.68 |
| AT3G66656.1 | Thale cress | nucleus | 23.6 | 21.35 |
| PGSC0003DMT400088968 | Potato | nucleus | 13.66 | 20.0 |
| Solyc10g018080.1.1 | Tomato | cytosol | 18.63 | 19.87 |
| PGSC0003DMT400092871 | Potato | nucleus | 16.77 | 19.29 |
| PGSC0003DMT400095980 | Potato | nucleus | 20.5 | 19.08 |
| Solyc10g018110.1.1 | Tomato | nucleus | 21.74 | 19.02 |
| PGSC0003DMT400095917 | Potato | cytosol | 15.53 | 18.94 |
| PGSC0003DMT400097360 | Potato | cytosol | 15.53 | 18.94 |
| PGSC0003DMT400093647 | Potato | nucleus | 16.15 | 18.06 |
| PGSC0003DMT400087813 | Potato | nucleus | 19.88 | 17.58 |
| Solyc03g034260.1.1 | Tomato | nucleus | 19.88 | 17.39 |
| Solyc10g050940.1.1 | Tomato | nucleus | 18.01 | 17.16 |
| PGSC0003DMT400091428 | Potato | nucleus | 18.01 | 16.86 |
| Solyc10g018070.1.1 | Tomato | nucleus | 12.42 | 16.81 |
| Solyc04g056740.1.1 | Tomato | nucleus | 18.63 | 16.67 |
| PGSC0003DMT400093117 | Potato | nucleus | 18.63 | 16.67 |
| PGSC0003DMT400091277 | Potato | nucleus | 18.63 | 16.67 |
| Solyc10g050900.1.1 | Tomato | nucleus | 17.39 | 16.57 |
| PGSC0003DMT400097679 | Potato | cytosol | 13.04 | 16.41 |
| PGSC0003DMT400093319 | Potato | nucleus | 18.01 | 16.29 |
| PGSC0003DMT400090103 | Potato | nucleus | 18.01 | 16.29 |
| Solyc10g050950.1.1 | Tomato | nucleus | 16.15 | 16.15 |
| Solyc06g059780.1.1 | Tomato | nucleus | 18.01 | 16.11 |
| Solyc06g054680.1.1 | Tomato | nucleus | 17.39 | 15.56 |
| PGSC0003DMT400094886 | Potato | nucleus | 17.39 | 15.56 |
| PGSC0003DMT400095190 | Potato | nucleus | 17.39 | 15.56 |
| Solyc03g033570.1.1 | Tomato | nucleus | 17.39 | 15.38 |
| Solyc04g056550.1.1 | Tomato | nucleus | 17.39 | 15.38 |
| PGSC0003DMT400089966 | Potato | cytosol | 16.15 | 15.29 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 22.98 | 15.16 |
| Solyc01g097850.1.1 | Tomato | nucleus | 16.15 | 15.12 |
| Solyc03g033890.1.1 | Tomato | nucleus | 13.04 | 15.0 |
| PGSC0003DMT400027289 | Potato | cytosol | 11.8 | 14.73 |
| AT2G34440.1 | Thale cress | nucleus | 15.53 | 14.53 |
| PGSC0003DMT400090655 | Potato | cytosol | 15.53 | 14.37 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 21.74 | 14.23 |
| AT2G24840.1 | Thale cress | nucleus | 22.98 | 14.02 |
| Solyc03g033930.1.1 | Tomato | cytosol | 8.7 | 14.0 |
| PGSC0003DMT400095957 | Potato | cytosol | 11.18 | 13.95 |
| PGSC0003DMT400088611 | Potato | nucleus | 14.29 | 13.94 |
| Solyc03g033880.1.1 | Tomato | cytosol | 15.53 | 13.59 |
| AT1G01530.1 | Thale cress | nucleus | 20.5 | 13.36 |
| AT1G65360.1 | Thale cress | nucleus | 18.63 | 13.27 |
| Solyc06g065960.1.1 | Tomato | nucleus | 7.45 | 13.19 |
| Solyc03g033900.1.1 | Tomato | nucleus | 14.91 | 13.11 |
| PGSC0003DMT400089582 | Potato | cytosol | 13.04 | 13.04 |
| Solyc03g033940.1.1 | Tomato | nucleus | 14.91 | 12.77 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 8.07 | 12.62 |
| AT4G36590.1 | Thale cress | nucleus | 19.25 | 12.5 |
| PGSC0003DMT400088010 | Potato | cytosol | 12.42 | 12.42 |
| AT1G17310.2 | Thale cress | nucleus | 17.39 | 12.28 |
| AT5G60440.1 | Thale cress | nucleus | 22.36 | 12.04 |
| Solyc03g007020.1.1 | Tomato | mitochondrion, nucleus, plastid | 15.53 | 11.63 |
| PGSC0003DMT400094043 | Potato | cytosol | 10.56 | 11.41 |
| AT1G72350.1 | Thale cress | nucleus | 15.53 | 11.16 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 17.39 | 8.07 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:841917 | UniProt:A0A178WBF1 | ProteinID:AAC64887.1 | ProteinID:AEE33143.1 |
| Symbol:AGL85 | ArrayExpress:AT1G54760 | EnsemblPlantsGene:AT1G54760 | RefSeq:AT1G54760 | TAIR:AT1G54760 | RefSeq:AT1G54760-TAIR-G |
| EnsemblPlants:AT1G54760.1 | TAIR:AT1G54760.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008236 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| RefSeq:NP_175874.1 | ProteinID:OAP14825.1 | PFAM:PF00319 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 |
| UniProt:Q9ZVL8 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00000A1DD6 | SEG:seg |
Description
AGL85AGAMOUS-like 85 [Source:UniProtKB/TrEMBL;Acc:Q9ZVL8]
Coordinates
chr1:+:20433912..20434397
Molecular Weight (calculated)
18176.4 Da
IEP (calculated)
4.839
GRAVY (calculated)
-0.635
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTDWSHYLS VEMESTISNE LSILCGAEVA FLGYSCSGKP YTFGSPSFQA VAERFLNREA SSSLQRSVMN AHQQAKIQEL CKVYNRMVEE AKTEEAKVKK
101: AAALAETMPV DEDAWWKVDP KEVEDHEEAK KIMEKCEGLY EKLCNEAAAR IQRGDAENNN K
101: AAALAETMPV DEDAWWKVDP KEVEDHEEAK KIMEKCEGLY EKLCNEAAAR IQRGDAENNN K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.