Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400095190 | Potato | nucleus | 81.32 | 82.22 |
| Solyc04g056740.1.1 | Tomato | nucleus | 74.73 | 75.56 |
| Solyc06g054680.1.1 | Tomato | nucleus | 62.09 | 62.78 |
| Solyc06g059780.1.1 | Tomato | nucleus | 62.09 | 62.78 |
| Solyc10g050900.1.1 | Tomato | nucleus | 55.49 | 59.76 |
| Solyc10g050950.1.1 | Tomato | nucleus | 52.75 | 59.63 |
| Solyc10g050940.1.1 | Tomato | nucleus | 53.85 | 57.99 |
| Solyc10g018070.1.1 | Tomato | nucleus | 34.07 | 52.1 |
| Solyc01g097850.1.1 | Tomato | nucleus | 48.35 | 51.16 |
| Solyc06g065960.1.1 | Tomato | nucleus | 25.27 | 50.55 |
| Solyc10g018080.1.1 | Tomato | cytosol | 40.11 | 48.34 |
| Solyc10g018110.1.1 | Tomato | nucleus | 48.35 | 47.83 |
| Solyc03g034260.1.1 | Tomato | nucleus | 48.35 | 47.83 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 13.74 | 44.64 |
| Solyc04g025970.1.1 | Tomato | cytosol, nucleus, peroxisome | 27.47 | 42.73 |
| Solyc03g033570.1.1 | Tomato | nucleus | 41.76 | 41.76 |
| Solyc03g033900.1.1 | Tomato | nucleus | 41.21 | 40.98 |
| Solyc03g033890.1.1 | Tomato | nucleus | 31.32 | 40.71 |
| Solyc03g033880.1.1 | Tomato | cytosol | 39.56 | 39.13 |
| Solyc03g033940.1.1 | Tomato | nucleus | 40.11 | 38.83 |
| Solyc03g007020.1.1 | Tomato | mitochondrion, nucleus, plastid | 45.05 | 38.14 |
| Solyc03g033930.1.1 | Tomato | cytosol | 20.88 | 38.0 |
| Solyc01g106710.1.1 | Tomato | nucleus | 35.16 | 28.96 |
| Solyc04g025110.1.1 | Tomato | mitochondrion, nucleus, plastid | 19.78 | 27.69 |
| Solyc01g106720.1.1 | Tomato | nucleus | 31.87 | 27.49 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 20.88 | 27.34 |
| Solyc04g047870.1.1 | Tomato | mitochondrion, nucleus | 27.47 | 26.32 |
| Solyc04g025030.1.1 | Tomato | mitochondrion | 18.68 | 25.19 |
| Solyc01g106730.1.1 | Tomato | mitochondrion | 29.67 | 24.43 |
| CDX99867 | Canola | nucleus | 25.27 | 23.71 |
| AT1G28460.1 | Thale cress | nucleus | 23.08 | 23.08 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 30.77 | 22.76 |
| CDY26304 | Canola | nucleus | 23.08 | 22.7 |
| AT1G29962.1 | Thale cress | nucleus | 23.08 | 22.7 |
| Solyc11g069770.1.1 | Tomato | nucleus | 22.53 | 22.65 |
| Solyc04g064860.1.1 | Tomato | plastid | 28.57 | 22.32 |
| Bra032347.1-P | Field mustard | nucleus | 21.98 | 21.51 |
| AT1G28450.1 | Thale cress | nucleus | 21.43 | 21.08 |
| Solyc01g060300.1.1 | Tomato | nucleus | 23.63 | 20.38 |
| Solyc01g106700.2.1 | Tomato | nucleus | 23.63 | 20.19 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 26.37 | 19.67 |
| AT1G54760.1 | Thale cress | nucleus | 15.38 | 17.39 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 28.57 | 14.99 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:K4BSV3 | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 |
| EnsemblPlantsGene:Solyc04g056550.1 | EnsemblPlants:Solyc04g056550.1.1 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002765E62 | : |
Description
No Description!
Coordinates
chr4:-:54500605..54501153
Molecular Weight (calculated)
20839.9 Da
IEP (calculated)
5.144
GRAVY (calculated)
-0.509
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKKTKGRQ KIPMQKIENK NALLTTFSKR RKGLFKKASE VVTECDVDIG IMMISPSGKP HSFFHPTADA IVSRFQNPDM QLSEGIRLDA TTARNRVNQL
101: KTRLEELDAI EDALFAQTIF YDQMAETQQK SSWESIEQLD ADELIINEAW LRDTNFKICD RLSQLEIGAS SSLGCEFLEY EV
101: KTRLEELDAI EDALFAQTIF YDQMAETQQK SSWESIEQLD ADELIINEAW LRDTNFKICD RLSQLEIGAS SSLGCEFLEY EV
001: MGRRKIKMEK VQDTNTKQVT FSKRRLGLFK KASELATLCN AEVGIVVFSP GNKPYSFGKP NFDVIAERFK NEFEEEEEGD SCETSGYSRG NRARQEKKIC
101: KRLNSITEEA EAEKKHGEDL HKWLESAEQD KFNKPIEELT LEELKEFEAK IKKISCGIQS NISHMQASSS LMFLSNDN
101: KRLNSITEEA EAEKKHGEDL HKWLESAEQD KFNKPIEELT LEELKEFEAK IKKISCGIQS NISHMQASSS LMFLSNDN
Arabidopsis Description
AGL91AGAMOUS-like 91 [Source:UniProtKB/TrEMBL;Acc:Q9C836]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.