Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086589 | Potato | mitochondrion | 77.37 | 88.55 |
| PGSC0003DMT400094942 | Potato | nucleus | 57.37 | 83.21 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 20.53 | 69.64 |
| Solyc01g106730.1.1 | Tomato | mitochondrion | 74.21 | 63.8 |
| Solyc04g025110.1.1 | Tomato | mitochondrion, nucleus, plastid | 38.42 | 56.15 |
| Solyc04g025030.1.1 | Tomato | mitochondrion | 35.26 | 49.63 |
| VIT_01s0010g01530.t01 | Wine grape | nucleus | 43.16 | 42.27 |
| Solyc01g106720.1.1 | Tomato | nucleus | 41.58 | 37.44 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 26.84 | 36.69 |
| Solyc01g106710.1.1 | Tomato | nucleus | 42.63 | 36.65 |
| Solyc04g056740.1.1 | Tomato | nucleus | 27.37 | 28.89 |
| Solyc11g069770.1.1 | Tomato | nucleus | 26.84 | 28.18 |
| Solyc10g018070.1.1 | Tomato | nucleus | 17.37 | 27.73 |
| Solyc04g056550.1.1 | Tomato | nucleus | 26.32 | 27.47 |
| Solyc01g097850.1.1 | Tomato | nucleus | 24.74 | 27.33 |
| Solyc10g018080.1.1 | Tomato | cytosol | 21.58 | 27.15 |
| Solyc10g050950.1.1 | Tomato | nucleus | 22.63 | 26.71 |
| Solyc04g025970.1.1 | Tomato | cytosol, nucleus, peroxisome | 16.32 | 26.5 |
| Solyc01g060300.1.1 | Tomato | nucleus | 28.95 | 26.07 |
| Solyc10g050900.1.1 | Tomato | nucleus | 23.16 | 26.04 |
| Solyc03g034260.1.1 | Tomato | nucleus | 24.74 | 25.54 |
| Solyc01g106700.2.1 | Tomato | nucleus | 28.42 | 25.35 |
| Solyc10g018110.1.1 | Tomato | nucleus | 24.21 | 25.0 |
| Solyc06g054680.1.1 | Tomato | nucleus | 23.16 | 24.44 |
| Solyc06g059780.1.1 | Tomato | nucleus | 23.16 | 24.44 |
| Solyc10g050940.1.1 | Tomato | nucleus | 21.58 | 24.26 |
| Solyc03g033890.1.1 | Tomato | nucleus | 17.37 | 23.57 |
| Solyc04g064860.1.1 | Tomato | plastid | 28.42 | 23.18 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 30.0 | 23.17 |
| Solyc03g033570.1.1 | Tomato | nucleus | 22.11 | 23.08 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 26.84 | 20.9 |
| Solyc03g007020.1.1 | Tomato | mitochondrion, nucleus, plastid | 22.63 | 20.0 |
| Solyc03g033900.1.1 | Tomato | nucleus | 18.95 | 19.67 |
| Solyc03g033880.1.1 | Tomato | cytosol | 18.95 | 19.57 |
| Solyc03g033940.1.1 | Tomato | nucleus | 18.42 | 18.62 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 27.37 | 14.99 |
| Solyc03g033930.1.1 | Tomato | cytosol | 6.32 | 12.0 |
| Solyc06g065960.1.1 | Tomato | nucleus | 5.26 | 10.99 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:K4BRL4 | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 |
| EnsemblPlantsGene:Solyc04g047870.1 | EnsemblPlants:Solyc04g047870.1.1 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000276643A | : |
Description
No Description!
Coordinates
chr4:+:38205626..38206198
Molecular Weight (calculated)
21696.5 Da
IEP (calculated)
10.700
GRAVY (calculated)
-0.424
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRIFKGRQ RVDMVKITNG RNLGVTFSKR RAGLYKKACE LCMLCGAEIA IVIFSPEGKI FSFGHPSVET LVERFLGRNL PPPNNDVHNQ QIVAHREAGI
101: RELNTRLMNV EGALQMEKNR GESLQEIRKK ADGVWWQSPI KELNLFHLQH LKRALEILKQ KVVKEAQMVN NNAFPFQTLG SAWSPPNYTS
101: RELNTRLMNV EGALQMEKNR GESLQEIRKK ADGVWWQSPI KELNLFHLQH LKRALEILKQ KVVKEAQMVN NNAFPFQTLG SAWSPPNYTS
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.