Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091428 | Potato | nucleus | 85.47 | 85.47 |
| Solyc04g056740.1.1 | Tomato | nucleus | 56.98 | 54.44 |
| Solyc10g050900.1.1 | Tomato | nucleus | 52.33 | 53.25 |
| Solyc10g050940.1.1 | Tomato | nucleus | 51.74 | 52.66 |
| Solyc06g054680.1.1 | Tomato | nucleus | 53.49 | 51.11 |
| Solyc06g059780.1.1 | Tomato | nucleus | 53.49 | 51.11 |
| Solyc10g050950.1.1 | Tomato | nucleus | 47.67 | 50.93 |
| Solyc04g056550.1.1 | Tomato | nucleus | 51.16 | 48.35 |
| Solyc10g018070.1.1 | Tomato | nucleus | 32.56 | 47.06 |
| Solyc10g018110.1.1 | Tomato | nucleus | 48.26 | 45.11 |
| Solyc10g018080.1.1 | Tomato | cytosol | 39.53 | 45.03 |
| Solyc04g025970.1.1 | Tomato | cytosol, nucleus, peroxisome | 27.91 | 41.03 |
| Solyc03g034260.1.1 | Tomato | nucleus | 41.86 | 39.13 |
| Solyc03g033570.1.1 | Tomato | nucleus | 41.28 | 39.01 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 12.21 | 37.5 |
| Solyc06g065960.1.1 | Tomato | nucleus | 19.19 | 36.26 |
| Solyc03g033890.1.1 | Tomato | nucleus | 29.07 | 35.71 |
| Solyc03g007020.1.1 | Tomato | mitochondrion, nucleus, plastid | 44.19 | 35.35 |
| Solyc03g033900.1.1 | Tomato | nucleus | 37.21 | 34.97 |
| Solyc03g033880.1.1 | Tomato | cytosol | 36.63 | 34.24 |
| Solyc03g033940.1.1 | Tomato | nucleus | 36.63 | 33.51 |
| Solyc03g033930.1.1 | Tomato | cytosol | 15.7 | 27.0 |
| Solyc01g106710.1.1 | Tomato | nucleus | 33.14 | 25.79 |
| Solyc04g047870.1.1 | Tomato | mitochondrion, nucleus | 27.33 | 24.74 |
| Solyc01g106720.1.1 | Tomato | nucleus | 30.23 | 24.64 |
| Solyc04g025110.1.1 | Tomato | mitochondrion, nucleus, plastid | 18.6 | 24.62 |
| Solyc04g025030.1.1 | Tomato | mitochondrion | 19.19 | 24.44 |
| AT1G28460.1 | Thale cress | nucleus | 25.58 | 24.18 |
| AT1G28450.1 | Thale cress | nucleus | 25.0 | 23.24 |
| Solyc01g106730.1.1 | Tomato | mitochondrion | 29.65 | 23.08 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 18.6 | 23.02 |
| CDY26304 | Canola | nucleus | 24.42 | 22.7 |
| CDX99867 | Canola | nucleus | 25.58 | 22.68 |
| AT1G29962.1 | Thale cress | nucleus | 23.84 | 22.16 |
| Bra032347.1-P | Field mustard | nucleus | 23.26 | 21.51 |
| Solyc11g069770.1.1 | Tomato | nucleus | 21.51 | 20.44 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 29.07 | 20.33 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 26.16 | 18.44 |
| Solyc04g064860.1.1 | Tomato | plastid | 22.09 | 16.31 |
| AT1G54760.1 | Thale cress | nucleus | 15.12 | 16.15 |
| Solyc01g060300.1.1 | Tomato | nucleus | 19.19 | 15.64 |
| Solyc01g106700.2.1 | Tomato | nucleus | 19.19 | 15.49 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 26.16 | 12.97 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:K4B0H2 | PFAM:PF00319 | PRINTS:PR00404 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 | EnsemblPlantsGene:Solyc01g097850.1 |
| EnsemblPlants:Solyc01g097850.1.1 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002768213 | SEG:seg | : |
Description
No Description!
Coordinates
chr1:+:88554631..88555149
Molecular Weight (calculated)
20075.0 Da
IEP (calculated)
7.353
GRAVY (calculated)
-0.643
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MENKKSRGRQ KIPMKKIEKL GDLYASFSKR RLSLYKKASD LVFECDVDIG MIYFSPKGNP YSFFHPNVNT VVSRFQNPDM EFSESDLLIT TDNQVKVKEL
101: KSRLDELDII EDIAIATKKS YDEVIKARKR GWWESIEQLN EPQVTKFEAW MDTIIFNMQN RLNEMENGAS SS
101: KSRLDELDII EDIAIATKKS YDEVIKARKR GWWESIEQLN EPQVTKFEAW MDTIIFNMQN RLNEMENGAS SS
001: MGRRKIKMEK VQDTNTKQVT FSKRRLGLFK KASELATLCN AEVGIVVFSP GNKPYSFGKP NFDVIAERFK NEFEEEEEGD SCETSGYSRG NRARQEKKIC
101: KRLNSITEEA EAEKKHGEDL HKWLESAEQD KFNKPIEELT LEELKEFEAK IKKISCGIQS NISHMQASSS LMFLSNDN
101: KRLNSITEEA EAEKKHGEDL HKWLESAEQD KFNKPIEELT LEELKEFEAK IKKISCGIQS NISHMQASSS LMFLSNDN
Arabidopsis Description
AGL91AGAMOUS-like 91 [Source:UniProtKB/TrEMBL;Acc:Q9C836]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.