Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plasma membrane | 2.44 | 54.55 |
| CDY36151 | Canola | nucleus | 16.67 | 46.59 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 18.7 | 44.66 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 8.94 | 39.29 |
| KRH22644 | Soybean | nucleus | 21.95 | 38.85 |
| PGSC0003DMT400086435 | Potato | nucleus | 16.26 | 38.1 |
| Solyc10g018070.1.1 | Tomato | nucleus | 18.29 | 37.82 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 18.29 | 36.89 |
| PGSC0003DMT400091054 | Potato | plastid | 16.26 | 35.09 |
| PGSC0003DMT400092871 | Potato | nucleus | 19.92 | 35.0 |
| CDY69485 | Canola | nucleus | 17.48 | 34.68 |
| CDY71457 | Canola | nucleus | 17.48 | 34.68 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 23.17 | 34.34 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 20.33 | 34.25 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 31.3 | 34.22 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 33.74 | 34.02 |
| PGSC0003DMT400088968 | Potato | nucleus | 15.04 | 33.64 |
| Solyc04g025970.1.1 | Tomato | cytosol, nucleus, peroxisome | 15.85 | 33.33 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 46.34 | 32.85 |
| PGSC0003DMT400094942 | Potato | nucleus | 17.07 | 32.06 |
| Solyc10g050900.1.1 | Tomato | nucleus | 21.95 | 31.95 |
| KRH33030 | Soybean | nucleus | 14.63 | 31.86 |
| KRH32912 | Soybean | nucleus | 22.36 | 31.79 |
| KRH32910 | Soybean | nucleus | 22.76 | 31.46 |
| PGSC0003DMT400093319 | Potato | nucleus | 22.76 | 31.46 |
| KRH32900 | Soybean | nucleus | 21.95 | 31.21 |
| KRH32901 | Soybean | nucleus | 21.95 | 31.21 |
| KRH32909 | Soybean | nucleus | 21.95 | 31.21 |
| KRH32915 | Soybean | nucleus | 21.95 | 31.21 |
| KRH32946 | Soybean | nucleus | 21.95 | 31.21 |
| PGSC0003DMT400095190 | Potato | nucleus | 22.76 | 31.11 |
| Solyc10g050950.1.1 | Tomato | nucleus | 20.33 | 31.06 |
| KRH32917 | Soybean | nucleus | 22.36 | 30.9 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 14.63 | 30.77 |
| Solyc04g025110.1.1 | Tomato | mitochondrion, nucleus, plastid | 16.26 | 30.77 |
| Solyc04g056550.1.1 | Tomato | nucleus | 22.76 | 30.77 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 21.95 | 30.68 |
| KRG88448 | Soybean | nucleus | 21.54 | 30.64 |
| Bra032057.1-P | Field mustard | nucleus | 22.36 | 30.56 |
| PGSC0003DMT400093117 | Potato | nucleus | 22.36 | 30.56 |
| Solyc04g056740.1.1 | Tomato | nucleus | 22.36 | 30.56 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 20.73 | 30.54 |
| VIT_01s0010g01530.t01 | Wine grape | nucleus | 23.98 | 30.41 |
| PGSC0003DMT400090103 | Potato | nucleus | 21.95 | 30.34 |
| AT1G29962.1 | Thale cress | nucleus | 22.76 | 30.27 |
| CDY26304 | Canola | nucleus | 22.76 | 30.27 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 18.7 | 30.26 |
| PGSC0003DMT400091428 | Potato | nucleus | 21.14 | 30.23 |
| PGSC0003DMT400095957 | Potato | cytosol | 15.85 | 30.23 |
| AT1G28460.1 | Thale cress | nucleus | 22.36 | 30.22 |
| Bra032347.1-P | Field mustard | nucleus | 22.76 | 30.11 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 28.86 | 30.08 |
| KRH32904 | Soybean | nucleus | 21.14 | 30.06 |
| KRH32916 | Soybean | nucleus | 21.14 | 30.06 |
| PGSC0003DMT400091277 | Potato | nucleus | 21.95 | 30.0 |
| PGSC0003DMT400094886 | Potato | nucleus | 21.95 | 30.0 |
| Solyc04g047870.1.1 | Tomato | mitochondrion, nucleus | 23.17 | 30.0 |
| KRH71935 | Soybean | nucleus | 21.54 | 29.94 |
| PGSC0003DMT400094062 | Potato | nucleus | 24.8 | 29.9 |
| CDX99867 | Canola | nucleus | 23.58 | 29.9 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 20.33 | 29.76 |
| AT2G34440.1 | Thale cress | nucleus | 20.73 | 29.65 |
| KRH72149 | Soybean | mitochondrion | 20.33 | 29.59 |
| Solyc10g018080.1.1 | Tomato | cytosol | 17.89 | 29.14 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 25.2 | 29.11 |
| PGSC0003DMT400097162 | Potato | nucleus | 19.51 | 29.09 |
| Solyc01g097850.1.1 | Tomato | nucleus | 20.33 | 29.07 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 25.2 | 28.97 |
| AT1G28450.1 | Thale cress | nucleus | 21.54 | 28.65 |
| Solyc01g106720.1.1 | Tomato | nucleus | 24.39 | 28.44 |
| Solyc06g054680.1.1 | Tomato | nucleus | 20.73 | 28.33 |
| Solyc06g059780.1.1 | Tomato | nucleus | 20.73 | 28.33 |
| PGSC0003DMT400095980 | Potato | nucleus | 19.92 | 28.32 |
| KRH35626 | Soybean | nucleus | 26.02 | 28.32 |
| Solyc10g018110.1.1 | Tomato | nucleus | 21.14 | 28.26 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 25.61 | 28.12 |
| KRH32873 | Soybean | nucleus | 24.8 | 28.11 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 15.85 | 28.06 |
| KRG91150 | Soybean | nucleus | 25.61 | 27.88 |
| Solyc10g050940.1.1 | Tomato | nucleus | 19.11 | 27.81 |
| CDX81713 | Canola | nucleus | 18.29 | 27.78 |
| VIT_03s0088g00590.t01 | Wine grape | nucleus | 23.98 | 27.57 |
| Bra021910.1-P | Field mustard | nucleus | 20.33 | 27.47 |
| Bra026764.1-P | Field mustard | nucleus | 18.7 | 27.38 |
| CDY55987 | Canola | nucleus | 18.7 | 27.38 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 16.67 | 27.33 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 17.89 | 27.33 |
| PGSC0003DMT400088611 | Potato | nucleus | 18.29 | 27.27 |
| KRH72042 | Soybean | extracellular | 11.38 | 27.18 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 24.39 | 27.15 |
| Solyc01g106710.1.1 | Tomato | nucleus | 24.39 | 27.15 |
| Solyc01g106730.1.1 | Tomato | mitochondrion | 24.39 | 27.15 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 22.36 | 27.09 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 20.73 | 26.98 |
| VIT_03s0088g00610.t01 | Wine grape | cytosol | 23.98 | 26.94 |
| PGSC0003DMT400013136 | Potato | nucleus | 21.54 | 26.9 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 21.54 | 26.9 |
| PGSC0003DMT400093647 | Potato | nucleus | 15.45 | 26.39 |
| KRH72146 | Soybean | nucleus | 20.33 | 26.32 |
| KRH60217 | Soybean | nucleus | 18.7 | 25.99 |
| Solyc04g025030.1.1 | Tomato | mitochondrion | 14.23 | 25.93 |
| PGSC0003DMT400089966 | Potato | cytosol | 17.89 | 25.88 |
| Solyc03g033890.1.1 | Tomato | nucleus | 14.63 | 25.71 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 19.11 | 25.68 |
| Solyc03g033900.1.1 | Tomato | nucleus | 19.11 | 25.68 |
| PGSC0003DMT400085261 | Potato | nucleus | 17.07 | 25.61 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 20.33 | 25.38 |
| AT3G66656.1 | Thale cress | nucleus | 18.29 | 25.28 |
| KRG99424 | Soybean | nucleus | 18.7 | 25.27 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 21.54 | 25.12 |
| KRG91147 | Soybean | nucleus | 24.39 | 25.1 |
| CDY31547 | Canola | nucleus | 28.46 | 25.09 |
| CDY61930 | Canola | nucleus | 28.46 | 25.09 |
| Bra002480.1-P | Field mustard | nucleus | 28.05 | 24.73 |
| PGSC0003DMT400087813 | Potato | nucleus | 18.29 | 24.73 |
| Solyc03g033570.1.1 | Tomato | nucleus | 18.29 | 24.73 |
| PGSC0003DMT400090655 | Potato | cytosol | 17.48 | 24.71 |
| KRH35628 | Soybean | nucleus | 24.8 | 24.7 |
| Bra007829.1-P | Field mustard | nucleus | 20.73 | 24.64 |
| PGSC0003DMT400095852 | Potato | cytosol | 14.63 | 24.49 |
| KRH28025 | Soybean | nucleus | 16.67 | 24.4 |
| KRG91148 | Soybean | nucleus | 23.98 | 24.38 |
| KRH45604 | Soybean | nucleus | 18.7 | 24.34 |
| PGSC0003DMT400088010 | Potato | cytosol | 15.85 | 24.22 |
| CDY09199 | Canola | nucleus | 24.39 | 24.19 |
| KRH60216 | Soybean | nucleus | 17.89 | 23.78 |
| PGSC0003DMT400086619 | Potato | nucleus | 17.89 | 23.66 |
| PGSC0003DMT400089582 | Potato | cytosol | 15.45 | 23.6 |
| Bra020242.1-P | Field mustard | nucleus | 23.58 | 23.39 |
| Solyc03g007020.1.1 | Tomato | mitochondrion, nucleus, plastid | 20.33 | 23.26 |
| KRH35629 | Soybean | nucleus | 19.92 | 23.22 |
| AT4G36590.1 | Thale cress | nucleus | 23.17 | 22.98 |
| Bra001209.1-P | Field mustard | nucleus | 16.67 | 22.91 |
| CDX74094 | Canola | nucleus | 16.67 | 22.91 |
| CDY57614 | Canola | nucleus | 16.67 | 22.91 |
| Solyc03g033940.1.1 | Tomato | nucleus | 17.48 | 22.87 |
| CDY42198 | Canola | nucleus | 25.61 | 22.83 |
| PGSC0003DMT400094043 | Potato | cytosol | 13.82 | 22.82 |
| CDY09205 | Canola | nucleus | 26.02 | 22.78 |
| CDY31718 | Canola | nucleus | 21.95 | 22.59 |
| CDY28567 | Canola | mitochondrion, nucleus | 22.76 | 22.58 |
| CDY09204 | Canola | nucleus | 22.76 | 22.49 |
| CDX95426 | Canola | nucleus | 25.2 | 22.46 |
| Solyc03g033880.1.1 | Tomato | cytosol | 16.67 | 22.28 |
| Solyc03g034260.1.1 | Tomato | nucleus | 16.67 | 22.28 |
| AT5G60440.1 | Thale cress | nucleus | 26.83 | 22.07 |
| CDY15761 | Canola | nucleus | 19.92 | 21.97 |
| Bra022434.1-P | Field mustard | nucleus | 25.2 | 21.91 |
| Bra011938.1-P | Field mustard | nucleus | 21.14 | 21.85 |
| CDY04574 | Canola | nucleus | 21.14 | 21.85 |
| PGSC0003DMT400092448 | Potato | plastid | 19.92 | 21.78 |
| AT1G54760.1 | Thale cress | nucleus | 14.23 | 21.74 |
| AT1G65360.1 | Thale cress | nucleus | 19.92 | 21.68 |
| Bra020247.1-P | Field mustard | cytosol | 23.58 | 21.56 |
| KRH41503 | Soybean | nucleus | 13.82 | 21.25 |
| AT2G24840.1 | Thale cress | nucleus | 22.76 | 21.21 |
| CDY46165 | Canola | nucleus | 24.39 | 21.2 |
| AT1G01530.1 | Thale cress | nucleus | 21.14 | 21.05 |
| CDY24623 | Canola | nucleus | 23.98 | 20.85 |
| Bra038225.1-P | Field mustard | nucleus | 21.95 | 20.69 |
| KRG91149 | Soybean | mitochondrion | 20.33 | 20.66 |
| KRH35627 | Soybean | mitochondrion | 20.33 | 20.24 |
| Solyc03g033930.1.1 | Tomato | cytosol | 7.72 | 19.0 |
| PGSC0003DMT400095917 | Potato | cytosol | 10.16 | 18.94 |
| PGSC0003DMT400097360 | Potato | cytosol | 10.16 | 18.94 |
| PGSC0003DMT400097679 | Potato | cytosol | 9.76 | 18.75 |
| Solyc01g060300.1.1 | Tomato | nucleus | 15.85 | 18.48 |
| PGSC0003DMT400027289 | Potato | cytosol | 9.35 | 17.83 |
| KRH32908 | Soybean | nucleus | 6.5 | 17.78 |
| Bra035685.1-P | Field mustard | nucleus | 19.11 | 16.04 |
| PGSC0003DMT400090145 | Potato | nucleus | 9.35 | 15.23 |
| Bra020246.1-P | Field mustard | cytosol | 10.16 | 14.71 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 5.69 | 13.59 |
| PGSC0003DMT400086182 | Potato | cytosol | 6.91 | 13.28 |
| Solyc06g065960.1.1 | Tomato | nucleus | 4.88 | 13.19 |
| CDY36150 | Canola | cytosol | 2.85 | 12.07 |
| CDY45604 | Canola | cytosol | 2.85 | 12.07 |
| PGSC0003DMT400092220 | Potato | cytosol | 6.1 | 11.72 |
| Bra020245.1-P | Field mustard | nucleus | 6.5 | 11.43 |
| Bra022446.1-P | Field mustard | cytosol | 8.13 | 10.2 |
| CDY51695 | Canola | cytosol | 8.13 | 10.2 |
| CDX76788 | Canola | cytosol | 4.07 | 8.85 |
| CDY34751 | Canola | cytosol | 4.07 | 8.85 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr4G28260_001 | EnsemblPlants:GSMUA_Achr4P28260_001 | EnsemblPlants:GSMUA_Achr4T28260_001 | InterPro:IPR002100 |
| InterPro:IPR036879 | UniProt:M0SST8 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF164 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000295A723 |
| SEG:seg | : | : | : | : | : |
Description
Putative uncharacterized protein Sb07g007306 (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G28260_001]
Coordinates
chr4:+:26726005..26726745
Molecular Weight (calculated)
27100.2 Da
IEP (calculated)
6.632
GRAVY (calculated)
-0.487
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MLREKKKTSK GKQRIEMKKI ENEEARYISF SKRRNGIFGK ASELSTLCGT DLAVLISSPT GKLHSFGSPS VALVVDRFLS TGVDHSSGSV HEQSRRGQTI
101: QDLNHRLMEL ARRLEDAKAK KAALQERLEA AARGLDCERI DDLEGLGLDE LDRLMESLGR LKARANARTE EILTGISPEP TTVDHVGPWR HGGICTVHSD
201: SDGLGAQCPS NPVLAMTNQF DSAAPRSNPL METIDFLDIN GLFEEF
101: QDLNHRLMEL ARRLEDAKAK KAALQERLEA AARGLDCERI DDLEGLGLDE LDRLMESLGR LKARANARTE EILTGISPEP TTVDHVGPWR HGGICTVHSD
201: SDGLGAQCPS NPVLAMTNQF DSAAPRSNPL METIDFLDIN GLFEEF
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.