Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plasma membrane | 3.81 | 81.82 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 67.8 | 71.11 |
| Os09t0402533-00 | Rice | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 13.56 | 52.46 |
| HORVU6Hr1G081660.1 | Barley | nucleus | 38.98 | 50.83 |
| HORVU3Hr1G116800.1 | Barley | mitochondrion, nucleus, plastid | 37.71 | 49.17 |
| Os09t0116800-00 | Rice | mitochondrion | 37.29 | 41.9 |
| EES19977 | Sorghum | nucleus | 41.95 | 40.41 |
| Zm00001d039080_P001 | Maize | nucleus | 41.95 | 40.08 |
| TraesCS3D01G540700.1 | Wheat | mitochondrion, nucleus, plastid | 43.64 | 39.92 |
| TraesCS6A01G338400.1 | Wheat | nucleus | 42.37 | 39.84 |
| TraesCS6B01G369100.1 | Wheat | nucleus | 43.22 | 39.69 |
| TraesCS6D01G319100.1 | Wheat | nucleus | 43.22 | 39.53 |
| Os01t0975800-00 | Rice | nucleus | 34.75 | 39.42 |
| Zm00001d009628_P001 | Maize | nucleus | 41.1 | 39.11 |
| TraesCS3A01G535200.1 | Wheat | nucleus | 42.8 | 38.85 |
| TraesCS3B01G608600.1 | Wheat | mitochondrion | 42.37 | 38.46 |
| TraesCS6B01G369000.1 | Wheat | nucleus | 41.53 | 38.28 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 23.31 | 37.67 |
| TraesCS6A01G138300.1 | Wheat | nucleus | 29.66 | 35.53 |
| TraesCS3B01G612300.1 | Wheat | nucleus | 25.42 | 34.68 |
| TraesCS3B01G612700.1 | Wheat | nucleus | 26.69 | 32.47 |
| KXG34713 | Sorghum | nucleus | 33.47 | 32.11 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 33.05 | 31.97 |
| TraesCSU01G235300.1 | Wheat | nucleus | 26.27 | 31.96 |
| KXG34716 | Sorghum | nucleus | 30.93 | 31.47 |
| EER96088 | Sorghum | nucleus | 32.63 | 31.3 |
| Zm00001d019213_P001 | Maize | nucleus | 34.75 | 30.6 |
| OQU80165 | Sorghum | nucleus | 27.12 | 30.19 |
| EER96091 | Sorghum | nucleus | 29.66 | 29.05 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 30.08 | 28.86 |
| KXG24793 | Sorghum | nucleus | 28.81 | 27.53 |
| TraesCS5B01G008000.1 | Wheat | nucleus | 29.66 | 27.45 |
| OQU80162 | Sorghum | nucleus | 28.39 | 27.13 |
| Zm00001d024389_P001 | Maize | nucleus | 28.81 | 26.98 |
| OQU75616 | Sorghum | nucleus | 27.97 | 26.72 |
| KXG24792 | Sorghum | nucleus | 27.97 | 26.72 |
| TraesCS3D01G532900.1 | Wheat | nucleus | 27.97 | 26.29 |
| Zm00001d019214_P001 | Maize | nucleus | 31.78 | 25.6 |
| TraesCS1B01G322300.1 | Wheat | nucleus | 33.9 | 25.48 |
| Zm00001d038015_P001 | Maize | nucleus | 32.63 | 25.41 |
| TraesCS1D01G310700.1 | Wheat | nucleus | 33.05 | 25.16 |
| TraesCS3B01G612900.1 | Wheat | nucleus | 30.08 | 25.0 |
| TraesCS3B01G612800.1 | Wheat | nucleus | 30.08 | 25.0 |
| TraesCS3D01G446900.1 | Wheat | nucleus | 33.9 | 24.24 |
| TraesCS3A01G359300.1 | Wheat | nucleus | 33.47 | 24.01 |
| KXG29537 | Sorghum | nucleus | 31.36 | 23.72 |
| TraesCS3D01G513800.1 | Wheat | nucleus, plastid | 27.97 | 23.49 |
| TraesCS3B01G493100.1 | Wheat | nucleus | 33.47 | 22.57 |
| HORVU3Hr1G086260.1 | Barley | nucleus | 31.78 | 22.39 |
| TraesCS3B01G612500.1 | Wheat | nucleus | 29.24 | 21.7 |
| TraesCS3B01G612600.1 | Wheat | nucleus | 30.08 | 21.65 |
| TraesCS3B01G612400.1 | Wheat | nucleus | 29.66 | 20.96 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 30.08 | 20.46 |
| TraesCS5A01G010400.1 | Wheat | nucleus | 26.27 | 20.33 |
| TraesCS3B01G595700.1 | Wheat | nucleus | 32.63 | 19.9 |
| TraesCS3A01G527400.1 | Wheat | nucleus | 30.51 | 18.05 |
| HORVU1Hr1G067950.1 | Barley | nucleus | 32.2 | 17.59 |
| TraesCS3A01G454500.1 | Wheat | nucleus | 22.03 | 16.67 |
| TraesCS3B01G608700.1 | Wheat | mitochondrion, plastid | 14.83 | 11.18 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr8G07230_001 | EnsemblPlants:GSMUA_Achr8P07230_001 |
| EnsemblPlants:GSMUA_Achr8T07230_001 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M0TNC6 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF164 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002961B16 | SEG:seg | : | : |
Description
Putative Agamous-like MADS-box protein AGL62 [Source:GMGC_GENE;Acc:GSMUA_Achr8G07230_001]
Coordinates
chr8:+:4777554..4778264
Molecular Weight (calculated)
25756.0 Da
IEP (calculated)
9.903
GRAVY (calculated)
-0.330
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMPRKRKTS MGRQKIEIKR IESEEARQVC FSKRRAGLFK KANELSVLCG AELALIVFSP AGKPFSFGHP SVDSIVDRFL SRGPAPAPPP PPHPLPLPLP
101: PHAAAASADR RMLVPARPSA VHELDRQYSE LTERLEAERR RREALEAALR GQRGAAAHLL NANVEELGLA ELEQLQGSLE SLRWDAARRV DQLVFEAQTR
201: SLVMAGDAGG SGFVATAEGS MVIPPHGGFN YGYGSF
101: PHAAAASADR RMLVPARPSA VHELDRQYSE LTERLEAERR RREALEAALR GQRGAAAHLL NANVEELGLA ELEQLQGSLE SLRWDAARRV DQLVFEAQTR
201: SLVMAGDAGG SGFVATAEGS MVIPPHGGFN YGYGSF
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.