Factsheet for TraesCS3B01G612900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G612800.1	Wheat	nucleus	99.65	99.65
TraesCS3B01G612700.1	Wheat	nucleus	61.27	89.69
TraesCS3B01G612300.1	Wheat	nucleus	50.35	82.66
TraesCS3B01G612400.1	Wheat	nucleus	90.49	76.95
TraesCS3B01G612600.1	Wheat	nucleus	86.62	75.0
TraesCS3B01G612500.1	Wheat	nucleus	79.93	71.38
TraesCS3B01G608700.1	Wheat	mitochondrion, plastid	63.73	57.83
TraesCS3B01G595700.1	Wheat	nucleus	70.77	51.94
TraesCS3B01G608600.1	Wheat	mitochondrion	45.42	49.62
TraesCS6B01G369100.1	Wheat	nucleus	42.61	47.08
TraesCS5B01G008000.1	Wheat	nucleus	41.9	46.67
TraesCS6B01G369000.1	Wheat	nucleus	40.85	45.31
Os09t0402533-00	Rice	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	9.51	44.26
EES19977	Sorghum	nucleus	36.27	42.04
Zm00001d039080_P001	Maize	nucleus	35.92	41.3
Zm00001d009628_P001	Maize	nucleus	35.92	41.13
Os01t0975800-00	Rice	nucleus	29.58	40.38
Os09t0116800-00	Rice	mitochondrion	27.46	37.14
TraesCS3B01G493100.1	Wheat	nucleus	44.37	36.0
TraesCS1B01G322300.1	Wheat	nucleus	36.62	33.12
GSMUA_Achr5P26530_001	Banana	mitochondrion, nucleus, plastid	23.94	30.22
GSMUA_Achr8P07230_001	Banana	nucleus	25.0	30.08
TraesCS1B01G080200.1	Wheat	nucleus	17.96	28.65
TraesCS5B01G471900.1	Wheat	mitochondrion	15.49	25.43
TraesCS7B01G211300.1	Wheat	plastid	17.25	25.0
TraesCS7B01G240400.1	Wheat	plastid	17.25	25.0
TraesCS7B01G240500.1	Wheat	plastid	16.9	24.87

Protein Annotations

EnsemblPlants:TraesCS3B01G612900.1	EnsemblPlantsGene:TraesCS3B01G612900	Gene3D:3.40.1810.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	ncoils:Coil	PANTHER:PTHR11945	PANTHER:PTHR11945:SF225	PFAM:PF00319	PFscan:PS50066
PRINTS:PR00404	SEG:seg	SMART:SM00432	SUPFAM:SSF55455	MapMan:15.5.14	:

Description

No Description!

Coordinates

chr3B:+:830610856..830611710

Molecular Weight (calculated)

31009.9 Da

IEP (calculated)

6.729

GRAVY (calculated)

-0.495

Length

284 amino acids

Sequence
(BLAST)

001: MAAPNRRGGS GRKKIVIRRI EQEDARFVCY SKRRQGFFNK ATDLAVLTGA QVAALAFSPH GRAFSFGHPS VDSVVERFLA GEAAGAGAKE EGAADHRLLA
101: GEGAAGEDKK LEKLHQELDE LRTELTELKK RTKRTDKAMA KERSAGDQIA AWFDHKARDM GDEDMAAFFA ALMQMKDAVS DRANQVLLEA MHAHMSRMAE
201: VAPPPPPPQI FGGSTFEFGS SSGTANDGME FQFRVPPPQE QGFEAGMDMQ QMVMPAPPPS HVVAAGMDVQ EMPPPPGWIW SRCR

Best Arabidopsis Sequence Match ( AT4G36590.1 )
(BLAST)

001: MVRSTKGRQK IEMKKMENES NLQVTFSKRR FGLFKKASEL CTLSGAEILL IVFSPGGKVF SFGHPSVQEL IHRFSNPNHN SAIVHHQNNN LQLVETRPDR
101: NIQYLNNILT EVLANQEKEK QKRMVLDLLK ESREQVGNWY EKDVKDLDMN ETNQLISALQ DVKKKLVREM SQYSQVNVSQ NYFGQSSGVI GGGNVGIDLF
201: DQRRNAFNYN PNMVFPNHTP PMFGYNNDGV LVPISNMNYM SSYNFNQS

Arabidopsis Description

MADS-box protein [Source:UniProtKB/TrEMBL;Acc:O23222]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.