Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0975800-00 | Rice | nucleus | 71.43 | 72.12 |
| Os09t0402533-00 | Rice | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 19.05 | 65.57 |
| HORVU3Hr1G116800.1 | Barley | mitochondrion, nucleus, plastid | 50.48 | 58.56 |
| HORVU6Hr1G081660.1 | Barley | nucleus | 49.05 | 56.91 |
| EES19977 | Sorghum | nucleus | 57.62 | 49.39 |
| Zm00001d009628_P001 | Maize | nucleus | 57.62 | 48.79 |
| Zm00001d039080_P001 | Maize | nucleus | 57.14 | 48.58 |
| TraesCS3B01G608600.1 | Wheat | mitochondrion | 57.14 | 46.15 |
| TraesCS3A01G535200.1 | Wheat | nucleus | 56.19 | 45.38 |
| TraesCS3D01G540700.1 | Wheat | mitochondrion, nucleus, plastid | 55.71 | 45.35 |
| TraesCS6B01G369000.1 | Wheat | nucleus | 52.38 | 42.97 |
| TraesCS6A01G338400.1 | Wheat | nucleus | 50.95 | 42.63 |
| TraesCS6B01G369100.1 | Wheat | nucleus | 51.9 | 42.41 |
| TraesCS6D01G319100.1 | Wheat | nucleus | 51.9 | 42.25 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 41.9 | 37.29 |
| TraesCS3B01G612300.1 | Wheat | nucleus | 29.52 | 35.84 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 37.62 | 35.11 |
| TraesCS3B01G612700.1 | Wheat | nucleus | 32.38 | 35.05 |
| TraesCSU01G235300.1 | Wheat | nucleus | 31.9 | 34.54 |
| Os12t0407000-00 | Rice | mitochondrion | 31.43 | 34.02 |
| Os06t0504100-00 | Rice | mitochondrion | 33.33 | 33.33 |
| TraesCS5B01G008000.1 | Wheat | nucleus | 35.71 | 29.41 |
| TraesCS3B01G612800.1 | Wheat | nucleus | 37.14 | 27.46 |
| TraesCS3B01G612900.1 | Wheat | nucleus | 37.14 | 27.46 |
| TraesCS3D01G532900.1 | Wheat | nucleus | 32.38 | 27.09 |
| TraesCS3D01G513800.1 | Wheat | nucleus, plastid | 34.29 | 25.62 |
| TraesCS1D01G310700.1 | Wheat | nucleus | 36.67 | 24.84 |
| TraesCS3A01G359300.1 | Wheat | nucleus | 38.57 | 24.62 |
| TraesCS1B01G322300.1 | Wheat | nucleus | 36.67 | 24.52 |
| TraesCS3B01G612500.1 | Wheat | nucleus | 36.67 | 24.21 |
| TraesCS3D01G446900.1 | Wheat | nucleus | 37.62 | 23.94 |
| HORVU3Hr1G086260.1 | Barley | nucleus | 37.62 | 23.58 |
| TraesCS3B01G612400.1 | Wheat | nucleus | 37.14 | 23.35 |
| TraesCS3B01G612600.1 | Wheat | nucleus | 36.19 | 23.17 |
| TraesCS3B01G493100.1 | Wheat | nucleus | 36.67 | 22.0 |
| TraesCS3B01G595700.1 | Wheat | nucleus | 39.05 | 21.19 |
| TraesCS5A01G010400.1 | Wheat | nucleus | 30.0 | 20.66 |
| TraesCS3A01G527400.1 | Wheat | nucleus | 35.71 | 18.8 |
| HORVU1Hr1G067950.1 | Barley | nucleus | 37.14 | 18.06 |
| TraesCS3A01G454500.1 | Wheat | nucleus | 25.71 | 17.31 |
| TraesCS3B01G608700.1 | Wheat | mitochondrion, plastid | 16.67 | 11.18 |
Protein Annotations
| EntrezGene:107275478 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:BAD17598.1 | ProteinID:BAD17728.1 | ProteinID:BAT06862.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | EnsemblPlantsGene:Os09g0116800 |
| EnsemblPlants:Os09t0116800-00 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF225 |
| UniProt:Q6YTZ9 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000035AF53 |
| RefSeq:XP_015611069.1 | SEG:seg | : | : | : | : |
Description
MADS BOX GENE 78Similar to DNA binding protein. (Os09t0116800-00)
Coordinates
chr9:-:1325181..1325826
Molecular Weight (calculated)
23182.0 Da
IEP (calculated)
10.787
GRAVY (calculated)
-0.344
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMVTAAAAR RRPSLGRQKI EIRRIESEEA RQVCFSKRRA GFFKKASELS ILCSADVAAV VFSPAGKAYS FGHPSVEFLL DRFLSSSLPA TAGKEEGSSV
101: SVVAELNRQY GELRAMVDAH KARRERAEKT MEKQRQRQPA AWMDPEAEVG RMAPEELMAL GTKLVAVQGG VAARADQMLR DALLLGRRPN TTTTTTTRAP
201: PGFFHLHPHF
101: SVVAELNRQY GELRAMVDAH KARRERAEKT MEKQRQRQPA AWMDPEAEVG RMAPEELMAL GTKLVAVQGG VAARADQMLR DALLLGRRPN TTTTTTTRAP
201: PGFFHLHPHF
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.