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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 2
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G446900.1 Wheat nucleus 86.86 92.12
TraesCS3A01G454500.1 Wheat nucleus 79.14 88.78
TraesCS5B01G008000.1 Wheat nucleus 50.0 68.63
HORVU3Hr1G086260.1 Barley nucleus 57.71 60.3
TraesCS6B01G369100.1 Wheat nucleus 35.71 48.64
TraesCS3B01G608600.1 Wheat mitochondrion 36.0 48.46
TraesCS3B01G612700.1 Wheat nucleus 26.0 46.91
TraesCS6B01G369000.1 Wheat nucleus 33.71 46.09
TraesCS3B01G612600.1 Wheat nucleus 42.86 45.73
TraesCS3B01G612400.1 Wheat nucleus 43.14 45.21
TraesCS3B01G612800.1 Wheat nucleus 36.29 44.72
TraesCS3B01G612500.1 Wheat nucleus 40.57 44.65
TraesCS3B01G612300.1 Wheat nucleus 22.0 44.51
TraesCS3B01G612900.1 Wheat nucleus 36.0 44.37
Os09t0402533-00 Rice endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 7.43 42.62
Zm00001d039080_P001 Maize nucleus 29.14 41.3
Zm00001d009628_P001 Maize nucleus 28.57 40.32
EES19977 Sorghum nucleus 28.0 40.0
TraesCS3B01G595700.1 Wheat nucleus 42.29 38.24
Os01t0975800-00 Rice nucleus 22.57 37.98
Os09t0116800-00 Rice mitochondrion 22.0 36.67
TraesCS3B01G608700.1 Wheat mitochondrion, plastid 31.71 35.46
GSMUA_Achr5P26530_001 Banana mitochondrion, nucleus, plastid 22.57 35.11
GSMUA_Achr8P07230_001 Banana nucleus 22.57 33.47
TraesCS1B01G322300.1 Wheat nucleus 28.57 31.85
TraesCS1B01G080200.1 Wheat nucleus 14.57 28.65
TraesCS7B01G240500.1 Wheat plastid 15.14 27.46
TraesCS5B01G471900.1 Wheat mitochondrion 13.43 27.17
TraesCS7B01G211300.1 Wheat plastid 14.57 26.02
TraesCS7B01G240400.1 Wheat plastid 14.57 26.02
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10GO:GO:0000977GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045944GO:GO:0046983InterPro:IPR002100InterPro:IPR036879InterPro:MADS_MEF2-like
PFAM:PF00319PRINTS:PR00404PFscan:PS50066PANTHER:PTHR11945PANTHER:PTHR11945:SF225SMART:SM00432
SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfTMHMM:TMhelixEnsemblPlantsGene:TraesCS3B01G493100EnsemblPlants:TraesCS3B01G493100.1
TIGR:cd00265SEG:seg::::
Description
No Description!
Coordinates
chr3B:+:738716910..738717962
Molecular Weight (calculated)
38176.6 Da
IEP (calculated)
5.139
GRAVY (calculated)
-0.257
Length
350 amino acids
Sequence
(BLAST)
001: MVSKQKGNGR QKIAIRRIEK ESARRVCFSK RRQGLFIKAT EMAVMCGAEV AIVAFSPGGK AFSFGHPSAE AVIDRFLAGG GAGVPSVAND NELKKLHLQH
101: GELRMLLKEV KGRKECVEKA MAKERAAGDQ IAMWLNPKLC DMGEKEMIAF AAKLMVVRAA ILERTNQALL DEQNIHRMLQ APALPLQPLF DGSTFEFGSS
201: SANTGMEMQQ MHMAMPPMQG FAAGMDMHHM PMEMAPPLGS AYEMDMQQIL MPTPPPSRFD AGMEMQQMVT VMSPQLEFAT EAEMQQMFMA MSPMSEFSAG
301: MEMPPPTGIA AGVEMVQQGA GPNMGFPSGG EGDETHTESE SESECLNQSE
Best Arabidopsis Sequence Match ( AT2G24840.1 )
(BLAST)
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.