Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G446900.1 | Wheat | nucleus | 86.86 | 92.12 |
TraesCS3A01G454500.1 | Wheat | nucleus | 79.14 | 88.78 |
TraesCS5B01G008000.1 | Wheat | nucleus | 50.0 | 68.63 |
HORVU3Hr1G086260.1 | Barley | nucleus | 57.71 | 60.3 |
TraesCS6B01G369100.1 | Wheat | nucleus | 35.71 | 48.64 |
TraesCS3B01G608600.1 | Wheat | mitochondrion | 36.0 | 48.46 |
TraesCS3B01G612700.1 | Wheat | nucleus | 26.0 | 46.91 |
TraesCS6B01G369000.1 | Wheat | nucleus | 33.71 | 46.09 |
TraesCS3B01G612600.1 | Wheat | nucleus | 42.86 | 45.73 |
TraesCS3B01G612400.1 | Wheat | nucleus | 43.14 | 45.21 |
TraesCS3B01G612800.1 | Wheat | nucleus | 36.29 | 44.72 |
TraesCS3B01G612500.1 | Wheat | nucleus | 40.57 | 44.65 |
TraesCS3B01G612300.1 | Wheat | nucleus | 22.0 | 44.51 |
TraesCS3B01G612900.1 | Wheat | nucleus | 36.0 | 44.37 |
Os09t0402533-00 | Rice | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 7.43 | 42.62 |
Zm00001d039080_P001 | Maize | nucleus | 29.14 | 41.3 |
Zm00001d009628_P001 | Maize | nucleus | 28.57 | 40.32 |
EES19977 | Sorghum | nucleus | 28.0 | 40.0 |
TraesCS3B01G595700.1 | Wheat | nucleus | 42.29 | 38.24 |
Os01t0975800-00 | Rice | nucleus | 22.57 | 37.98 |
Os09t0116800-00 | Rice | mitochondrion | 22.0 | 36.67 |
TraesCS3B01G608700.1 | Wheat | mitochondrion, plastid | 31.71 | 35.46 |
GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 22.57 | 35.11 |
GSMUA_Achr8P07230_001 | Banana | nucleus | 22.57 | 33.47 |
TraesCS1B01G322300.1 | Wheat | nucleus | 28.57 | 31.85 |
TraesCS1B01G080200.1 | Wheat | nucleus | 14.57 | 28.65 |
TraesCS7B01G240500.1 | Wheat | plastid | 15.14 | 27.46 |
TraesCS5B01G471900.1 | Wheat | mitochondrion | 13.43 | 27.17 |
TraesCS7B01G211300.1 | Wheat | plastid | 14.57 | 26.02 |
TraesCS7B01G240400.1 | Wheat | plastid | 14.57 | 26.02 |
Protein Annotations
MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF225 | SMART:SM00432 |
SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G493100 | EnsemblPlants:TraesCS3B01G493100.1 |
TIGR:cd00265 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:738716910..738717962
Molecular Weight (calculated)
38176.6 Da
IEP (calculated)
5.139
GRAVY (calculated)
-0.257
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKQKGNGR QKIAIRRIEK ESARRVCFSK RRQGLFIKAT EMAVMCGAEV AIVAFSPGGK AFSFGHPSAE AVIDRFLAGG GAGVPSVAND NELKKLHLQH
101: GELRMLLKEV KGRKECVEKA MAKERAAGDQ IAMWLNPKLC DMGEKEMIAF AAKLMVVRAA ILERTNQALL DEQNIHRMLQ APALPLQPLF DGSTFEFGSS
201: SANTGMEMQQ MHMAMPPMQG FAAGMDMHHM PMEMAPPLGS AYEMDMQQIL MPTPPPSRFD AGMEMQQMVT VMSPQLEFAT EAEMQQMFMA MSPMSEFSAG
301: MEMPPPTGIA AGVEMVQQGA GPNMGFPSGG EGDETHTESE SESECLNQSE
101: GELRMLLKEV KGRKECVEKA MAKERAAGDQ IAMWLNPKLC DMGEKEMIAF AAKLMVVRAA ILERTNQALL DEQNIHRMLQ APALPLQPLF DGSTFEFGSS
201: SANTGMEMQQ MHMAMPPMQG FAAGMDMHHM PMEMAPPLGS AYEMDMQQIL MPTPPPSRFD AGMEMQQMVT VMSPQLEFAT EAEMQQMFMA MSPMSEFSAG
301: MEMPPPTGIA AGVEMVQQGA GPNMGFPSGG EGDETHTESE SESECLNQSE
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.