Factsheet for TraesCS3B01G612300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G612700.1	Wheat	nucleus	83.24	74.23
TraesCS3B01G612900.1	Wheat	nucleus	82.66	50.35
TraesCS3B01G612800.1	Wheat	nucleus	82.66	50.35
TraesCS3B01G612500.1	Wheat	nucleus	84.97	46.23
TraesCS3B01G612400.1	Wheat	nucleus	85.55	44.31
Os09t0402533-00	Rice	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	15.03	42.62
TraesCS3B01G612600.1	Wheat	nucleus	79.19	41.77
Os01t0975800-00	Rice	nucleus	38.15	31.73
TraesCS3B01G608600.1	Wheat	mitochondrion	45.09	30.0
Os09t0116800-00	Rice	mitochondrion	35.84	29.52
TraesCS5B01G008000.1	Wheat	nucleus	43.35	29.41
EES19977	Sorghum	nucleus	41.62	29.39
TraesCS6B01G369100.1	Wheat	nucleus	43.35	29.18
Zm00001d009628_P001	Maize	nucleus	41.62	29.03
Zm00001d039080_P001	Maize	nucleus	41.04	28.74
TraesCS3B01G595700.1	Wheat	nucleus	64.16	28.68
TraesCS6B01G369000.1	Wheat	nucleus	41.62	28.12
GSMUA_Achr8P07230_001	Banana	nucleus	34.68	25.42
GSMUA_Achr5P26530_001	Banana	mitochondrion, nucleus, plastid	32.95	25.33
TraesCS1B01G080200.1	Wheat	nucleus	24.86	24.16
TraesCS3B01G608700.1	Wheat	mitochondrion, plastid	40.46	22.36
TraesCS3B01G493100.1	Wheat	nucleus	44.51	22.0
TraesCS5B01G471900.1	Wheat	mitochondrion	21.97	21.97
TraesCS1B01G322300.1	Wheat	nucleus	38.73	21.34
TraesCS7B01G240500.1	Wheat	plastid	23.7	21.24
TraesCS7B01G211300.1	Wheat	plastid	23.7	20.92
TraesCS7B01G240400.1	Wheat	plastid	23.7	20.92

Protein Annotations

EnsemblPlants:TraesCS3B01G612300.1	EnsemblPlantsGene:TraesCS3B01G612300	Gene3D:3.40.1810.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	ncoils:Coil	PANTHER:PTHR11945	PANTHER:PTHR11945:SF225	PFAM:PF00319	PFscan:PS50066
PRINTS:PR00404	SEG:seg	SMART:SM00432	SUPFAM:SSF55455	MapMan:15.5.14	:

Description

No Description!

Coordinates

chr3B:+:829742374..829742895

Molecular Weight (calculated)

19061.5 Da

IEP (calculated)

9.797

GRAVY (calculated)

-0.662

Length

173 amino acids

Sequence
(BLAST)

001: MAAPNRRGGS GRKKIVIRRI EQEDARFVCY FKRRQGFFNK ATDLAVLTGA QVAALAFSPR GRAFSFGHPS VDSVVERFLT GEAAGAGARE EGAADDRLLA
101: GDGAAGEDEK LEKLQQEFDE LRTELTELKK RTKRTDKAMA KERSAGDPKT CFRAYAPGYS LSNHSFLHQD SCK

Best Arabidopsis Sequence Match ( AT2G24840.1 )
(BLAST)

001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF

Arabidopsis Description

AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.