Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G116800.1 | Barley | mitochondrion, nucleus, plastid | 59.02 | 19.89 |
| Os01t0975800-00 | Rice | nucleus | 67.21 | 19.71 |
| HORVU6Hr1G081660.1 | Barley | nucleus | 57.38 | 19.34 |
| Os09t0116800-00 | Rice | mitochondrion | 65.57 | 19.05 |
| EES19977 | Sorghum | nucleus | 60.66 | 15.1 |
| TraesCS3B01G612300.1 | Wheat | nucleus | 42.62 | 15.03 |
| Zm00001d009628_P001 | Maize | nucleus | 60.66 | 14.92 |
| Zm00001d039080_P001 | Maize | nucleus | 59.02 | 14.57 |
| TraesCS6A01G338400.1 | Wheat | nucleus | 57.38 | 13.94 |
| TraesCSU01G235300.1 | Wheat | nucleus | 44.26 | 13.92 |
| TraesCS3B01G612700.1 | Wheat | nucleus | 44.26 | 13.92 |
| Os06t0504100-00 | Rice | mitochondrion | 47.54 | 13.81 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 50.82 | 13.78 |
| TraesCS6B01G369000.1 | Wheat | nucleus | 57.38 | 13.67 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 52.46 | 13.56 |
| TraesCS3A01G535200.1 | Wheat | nucleus | 57.38 | 13.46 |
| TraesCS3B01G608600.1 | Wheat | mitochondrion | 57.38 | 13.46 |
| Os12t0407000-00 | Rice | mitochondrion | 42.62 | 13.4 |
| TraesCS6B01G369100.1 | Wheat | nucleus | 55.74 | 13.23 |
| TraesCS6D01G319100.1 | Wheat | nucleus | 55.74 | 13.18 |
| TraesCS3D01G540700.1 | Wheat | mitochondrion, nucleus, plastid | 55.74 | 13.18 |
| TraesCS5B01G008000.1 | Wheat | nucleus | 40.98 | 9.8 |
| TraesCS3D01G532900.1 | Wheat | nucleus | 39.34 | 9.56 |
| TraesCS1B01G322300.1 | Wheat | nucleus | 49.18 | 9.55 |
| TraesCS3B01G612900.1 | Wheat | nucleus | 44.26 | 9.51 |
| TraesCS3B01G612800.1 | Wheat | nucleus | 44.26 | 9.51 |
| TraesCS1D01G310700.1 | Wheat | nucleus | 47.54 | 9.35 |
| TraesCS3D01G513800.1 | Wheat | nucleus, plastid | 40.98 | 8.9 |
| TraesCS3B01G612500.1 | Wheat | nucleus | 44.26 | 8.49 |
| TraesCS3B01G612600.1 | Wheat | nucleus | 44.26 | 8.23 |
| TraesCS3A01G359300.1 | Wheat | nucleus | 42.62 | 7.9 |
| TraesCS3B01G612400.1 | Wheat | nucleus | 42.62 | 7.78 |
| TraesCS3D01G446900.1 | Wheat | nucleus | 40.98 | 7.58 |
| HORVU3Hr1G086260.1 | Barley | nucleus | 40.98 | 7.46 |
| TraesCS3B01G493100.1 | Wheat | nucleus | 42.62 | 7.43 |
| HORVU1Hr1G067950.1 | Barley | nucleus | 47.54 | 6.71 |
| TraesCS3A01G527400.1 | Wheat | nucleus | 42.62 | 6.52 |
| TraesCS3B01G595700.1 | Wheat | nucleus | 40.98 | 6.46 |
| TraesCS3A01G454500.1 | Wheat | nucleus | 27.87 | 5.45 |
| TraesCS5A01G010400.1 | Wheat | nucleus | 26.23 | 5.25 |
| TraesCS3B01G608700.1 | Wheat | mitochondrion, plastid | 11.48 | 2.24 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0P0XN39 | ProteinID:BAT07984.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlantsGene:Os09g0402533 |
| EnsemblPlants:Os09t0402533-00 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF225 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000393BD96 | : |
Description
Similar to DNA binding protein. (Os09t0402533-00)
Coordinates
chr9:-:14132793..14133166
Molecular Weight (calculated)
6709.9 Da
IEP (calculated)
8.222
GRAVY (calculated)
0.133
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: VCFSRRRASF FEKASELSIL CSTSVASIVF SPAAKAYSFG QPSVEYILEH FLQKSASAET Q
001: MVKKTLGRRK VEIVKMTKES NLQVTFSKRK AGLFKKASEF CTLCDAKIAM IVFSPAGKVF SFGHPNVDVL LDHFRGCVVG HNNTNLDESY TKLHVQMLNK
101: SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
201: DQNGMTTNPT QTLLFGFDIM NRTPGV
101: SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
201: DQNGMTTNPT QTLLFGFDIM NRTPGV
Arabidopsis Description
AGL23Agamous-like MADS-box protein AGL23 [Source:UniProtKB/Swiss-Prot;Acc:O80807]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.