Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G535200.1 | Wheat | nucleus | 96.92 | 96.92 |
| TraesCS3D01G540700.1 | Wheat | mitochondrion, nucleus, plastid | 95.77 | 96.51 |
| HORVU3Hr1G116800.1 | Barley | mitochondrion, nucleus, plastid | 66.54 | 95.58 |
| TraesCS6B01G369100.1 | Wheat | nucleus | 79.62 | 80.54 |
| TraesCS6B01G369000.1 | Wheat | nucleus | 77.31 | 78.52 |
| Os01t0975800-00 | Rice | nucleus | 49.23 | 61.54 |
| Zm00001d039080_P001 | Maize | nucleus | 56.54 | 59.51 |
| EES19977 | Sorghum | nucleus | 54.62 | 57.96 |
| Os09t0402533-00 | Rice | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 13.46 | 57.38 |
| Zm00001d009628_P001 | Maize | nucleus | 54.62 | 57.26 |
| Os09t0116800-00 | Rice | mitochondrion | 46.15 | 57.14 |
| TraesCS5B01G008000.1 | Wheat | nucleus | 48.46 | 49.41 |
| TraesCS3B01G612700.1 | Wheat | nucleus | 36.15 | 48.45 |
| TraesCS3B01G612900.1 | Wheat | nucleus | 49.62 | 45.42 |
| TraesCS3B01G612800.1 | Wheat | nucleus | 49.62 | 45.42 |
| TraesCS3B01G612300.1 | Wheat | nucleus | 30.0 | 45.09 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 37.31 | 43.11 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 38.46 | 42.37 |
| TraesCS3B01G612400.1 | Wheat | nucleus | 50.38 | 39.22 |
| TraesCS3B01G612600.1 | Wheat | nucleus | 49.23 | 39.02 |
| TraesCS3B01G612500.1 | Wheat | nucleus | 47.69 | 38.99 |
| TraesCS5B01G471900.1 | Wheat | mitochondrion | 25.77 | 38.73 |
| TraesCS1B01G322300.1 | Wheat | nucleus | 46.15 | 38.22 |
| TraesCS1B01G080200.1 | Wheat | nucleus | 25.0 | 36.52 |
| TraesCS3B01G493100.1 | Wheat | nucleus | 48.46 | 36.0 |
| TraesCS7B01G240500.1 | Wheat | plastid | 24.62 | 33.16 |
| TraesCS3B01G595700.1 | Wheat | nucleus | 46.92 | 31.52 |
| TraesCS7B01G211300.1 | Wheat | plastid | 23.46 | 31.12 |
| TraesCS7B01G240400.1 | Wheat | plastid | 23.46 | 31.12 |
| TraesCS3B01G608700.1 | Wheat | mitochondrion, plastid | 33.46 | 27.8 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF225 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EnsemblPlantsGene:TraesCS3B01G608600 | EnsemblPlants:TraesCS3B01G608600.1 |
| TIGR:cd00265 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:826918889..826919671
Molecular Weight (calculated)
27779.3 Da
IEP (calculated)
7.424
GRAVY (calculated)
-0.304
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMATATAPR RRASMGRQKI EIRKIESEEA RQVCFSKRRA GLFKKASELA VLCGAEVAAV VFSPAGKAFS FGHPSVEAIL DRFVPSAAQQ PGAVVPGAGL
101: GAAGDRNLAE LNRQYGELRT QLEAEKARKE RAEEAMAKER AAGNQMAAWL DADLRDMGEE ELMAFAAALV EVQAAVSERA NQVLQEALNV GRSRSASRML
201: QAPPPPQQQQ QLAGGGTFEF GNTSTNAGME IQQMLLAMPP PPPPGFAPGM DMVQHGGFPY
101: GAAGDRNLAE LNRQYGELRT QLEAEKARKE RAEEAMAKER AAGNQMAAWL DADLRDMGEE ELMAFAAALV EVQAAVSERA NQVLQEALNV GRSRSASRML
201: QAPPPPQQQQ QLAGGGTFEF GNTSTNAGME IQQMLLAMPP PPPPGFAPGM DMVQHGGFPY
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.