Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G319100.1 | Wheat | nucleus | 94.94 | 94.57 |
| TraesCS6A01G338400.1 | Wheat | nucleus | 91.44 | 93.63 |
| HORVU6Hr1G081660.1 | Barley | nucleus | 64.2 | 91.16 |
| TraesCS6B01G369000.1 | Wheat | nucleus | 90.66 | 91.02 |
| TraesCS3B01G608600.1 | Wheat | mitochondrion | 80.54 | 79.62 |
| Zm00001d039080_P001 | Maize | nucleus | 58.75 | 61.13 |
| EES19977 | Sorghum | nucleus | 56.81 | 59.59 |
| Zm00001d009628_P001 | Maize | nucleus | 56.42 | 58.47 |
| Os01t0975800-00 | Rice | nucleus | 46.69 | 57.69 |
| Os09t0402533-00 | Rice | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 13.23 | 55.74 |
| Os09t0116800-00 | Rice | mitochondrion | 42.41 | 51.9 |
| TraesCS5B01G008000.1 | Wheat | nucleus | 47.08 | 47.45 |
| TraesCS3B01G612700.1 | Wheat | nucleus | 35.02 | 46.39 |
| TraesCS3B01G612300.1 | Wheat | nucleus | 29.18 | 43.35 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 39.69 | 43.22 |
| TraesCS3B01G612900.1 | Wheat | nucleus | 47.08 | 42.61 |
| TraesCS3B01G612800.1 | Wheat | nucleus | 47.08 | 42.61 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 36.58 | 41.78 |
| TraesCS5B01G471900.1 | Wheat | mitochondrion | 26.85 | 39.88 |
| TraesCS1B01G322300.1 | Wheat | nucleus | 48.25 | 39.49 |
| TraesCS3B01G612400.1 | Wheat | nucleus | 48.25 | 37.13 |
| TraesCS3B01G612500.1 | Wheat | nucleus | 45.91 | 37.11 |
| TraesCS1B01G080200.1 | Wheat | nucleus | 25.68 | 37.08 |
| TraesCS3B01G612600.1 | Wheat | nucleus | 46.69 | 36.59 |
| TraesCS3B01G493100.1 | Wheat | nucleus | 48.64 | 35.71 |
| TraesCS7B01G240500.1 | Wheat | plastid | 25.68 | 34.2 |
| TraesCS7B01G211300.1 | Wheat | plastid | 24.51 | 32.14 |
| TraesCS7B01G240400.1 | Wheat | plastid | 24.51 | 32.14 |
| TraesCS3B01G595700.1 | Wheat | nucleus | 45.53 | 30.23 |
| TraesCS3B01G608700.1 | Wheat | mitochondrion, plastid | 31.91 | 26.2 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF225 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EnsemblPlantsGene:TraesCS6B01G369100 | EnsemblPlants:TraesCS6B01G369100.1 |
| TIGR:cd00265 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:643131464..643132237
Molecular Weight (calculated)
27451.0 Da
IEP (calculated)
8.048
GRAVY (calculated)
-0.237
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKRKLSMG RQKIEIRRIE SEEARQVCFS KRRAGLFKKV SELAVLCGAE VAAVVFSPAG KAFSFGHPSV EAILDRFIPS AAQLGAAGAG AGLGAAGDRN
101: LAELNRQYGQ LREQLEAEKA RKERADEAMA KERAKGSQAA AWLNADLRDL GEEELMAFAA ALADVQAAVS ARANQVLQEA LDVGRARSAS RMLLAPPPQQ
201: QQLVGGGGFE FASCSANSRN EMEMQQMLMA MPPPPEFAAT GMEMIQQGLG PNSGFPF
101: LAELNRQYGQ LREQLEAEKA RKERADEAMA KERAKGSQAA AWLNADLRDL GEEELMAFAA ALADVQAAVS ARANQVLQEA LDVGRARSAS RMLLAPPPQQ
201: QQLVGGGGFE FASCSANSRN EMEMQQMLMA MPPPPEFAAT GMEMIQQGLG PNSGFPF
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.