Factsheet for TraesCS3B01G612700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G235300.1	Wheat	nucleus	98.45	98.45
TraesCS3B01G612300.1	Wheat	nucleus	74.23	83.24
TraesCS3B01G612900.1	Wheat	nucleus	89.69	61.27
TraesCS3B01G612800.1	Wheat	nucleus	89.69	61.27
TraesCS3B01G612400.1	Wheat	nucleus	92.27	53.59
TraesCS3B01G612500.1	Wheat	nucleus	87.63	53.46
TraesCS3B01G612600.1	Wheat	nucleus	84.54	50.0
Os09t0402533-00	Rice	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	13.92	44.26
TraesCS3B01G608600.1	Wheat	mitochondrion	48.45	36.15
TraesCS5B01G008000.1	Wheat	nucleus	47.42	36.08
Os01t0975800-00	Rice	nucleus	38.66	36.06
TraesCS6B01G369100.1	Wheat	nucleus	46.39	35.02
EES19977	Sorghum	nucleus	43.81	34.69
Zm00001d009628_P001	Maize	nucleus	44.33	34.68
Zm00001d039080_P001	Maize	nucleus	43.81	34.41
TraesCS6B01G369000.1	Wheat	nucleus	44.85	33.98
TraesCS3B01G595700.1	Wheat	nucleus	67.53	33.85
Os09t0116800-00	Rice	mitochondrion	35.05	32.38
TraesCS3B01G608700.1	Wheat	mitochondrion, plastid	51.03	31.63
GSMUA_Achr5P26530_001	Banana	mitochondrion, nucleus, plastid	31.96	27.56
TraesCS1B01G080200.1	Wheat	nucleus	25.26	27.53
GSMUA_Achr8P07230_001	Banana	nucleus	32.47	26.69
TraesCS1B01G322300.1	Wheat	nucleus	42.27	26.11
TraesCS3B01G493100.1	Wheat	nucleus	46.91	26.0
TraesCS5B01G471900.1	Wheat	mitochondrion	22.68	25.43
TraesCS7B01G211300.1	Wheat	plastid	24.74	24.49
TraesCS7B01G240400.1	Wheat	plastid	24.74	24.49
TraesCS7B01G240500.1	Wheat	plastid	24.23	24.35

Protein Annotations

EnsemblPlants:TraesCS3B01G612700.1	EnsemblPlantsGene:TraesCS3B01G612700	Gene3D:3.40.1810.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	ncoils:Coil	PANTHER:PTHR11945	PANTHER:PTHR11945:SF225	PFAM:PF00319	PFscan:PS50066
PRINTS:PR00404	SEG:seg	SMART:SM00432	SUPFAM:SSF55455	MapMan:15.5.14	:

Description

No Description!

Coordinates

chr3B:+:830112178..830112762

Molecular Weight (calculated)

21212.2 Da

IEP (calculated)

9.313

GRAVY (calculated)

-0.526

Length

194 amino acids

Sequence
(BLAST)

001: MAAPNRRGGS GRKKIVIRRI EQEDARFVCY SKRRQGFFSK ATDLAVLTGA QVAALAFSPR GRAFSFGHPS VDSVVERFLA GEAAGAGARE EGAADDRLLA
101: GEGAAGEDEK LEKLQQEFDE LRTELAELKK RTKRTDKAMA KERSAGDQIA AWFDPKARDM GDEDMAAFFA ALMQMKDASA IAPTRFCSRR CTPT

Best Arabidopsis Sequence Match ( AT4G36590.1 )
(BLAST)

001: MVRSTKGRQK IEMKKMENES NLQVTFSKRR FGLFKKASEL CTLSGAEILL IVFSPGGKVF SFGHPSVQEL IHRFSNPNHN SAIVHHQNNN LQLVETRPDR
101: NIQYLNNILT EVLANQEKEK QKRMVLDLLK ESREQVGNWY EKDVKDLDMN ETNQLISALQ DVKKKLVREM SQYSQVNVSQ NYFGQSSGVI GGGNVGIDLF
201: DQRRNAFNYN PNMVFPNHTP PMFGYNNDGV LVPISNMNYM SSYNFNQS

Arabidopsis Description

MADS-box protein [Source:UniProtKB/TrEMBL;Acc:O23222]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.