Factsheet for HORVU3Hr1G116800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, plastid
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G081660.1	Barley	nucleus	84.53	84.53
TraesCS3D01G540700.1	Wheat	mitochondrion, nucleus, plastid	95.03	66.67
TraesCS3B01G608600.1	Wheat	mitochondrion	95.58	66.54
TraesCS3A01G535200.1	Wheat	nucleus	95.03	66.15
Os09t0402533-00	Rice	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	19.89	59.02
Os01t0975800-00	Rice	nucleus	62.98	54.81
Os09t0116800-00	Rice	mitochondrion	58.56	50.48
Zm00001d039080_P001	Maize	nucleus	66.3	48.58
EES19977	Sorghum	nucleus	64.09	47.35
Zm00001d009628_P001	Maize	nucleus	63.54	46.37
GSMUA_Achr5P26530_001	Banana	mitochondrion, nucleus, plastid	47.51	38.22
GSMUA_Achr8P07230_001	Banana	nucleus	49.17	37.71
HORVU7Hr1G081190.1	Barley	nucleus	30.39	36.67
HORVU5Hr1G110410.2	Barley	nucleus	36.46	34.02
HORVU3Hr1G086260.1	Barley	nucleus	59.12	31.94
HORVU5Hr1G110470.1	Barley	plastid	37.02	27.02
HORVU7Hr1G081070.1	Barley	mitochondrion, nucleus	35.36	23.97
HORVU1Hr1G067950.1	Barley	nucleus	54.14	22.69

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A287MU43	ncoils:Coil	GO:GO:0000977	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	EnsemblPlantsGene:HORVU3Hr1G116800
EnsemblPlants:HORVU3Hr1G116800.1	InterPro:IPR002100	InterPro:IPR036879	InterPro:MADS_MEF2-like	PFAM:PF00319	PRINTS:PR00404
PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF225	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	UniParc:UPI000B474011	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:696463883..696464425

Molecular Weight (calculated)

19352.2 Da

IEP (calculated)

8.758

GRAVY (calculated)

-0.185

Length

181 amino acids

Sequence
(BLAST)

001: MAMATAPRRR ASMGRQKIEI RKIESEEARQ VCFSKRRAGL FKKASELAVL CGAEVAAVVF SPAGKAFSFG HPSVEAILDR FVPSAAQAAG AVVAAAGLGA
101: AGDRNLAELN RQYGNLRTQL EAEKARKERA EEAMSKERAA GNQMAAWLDA DLRDMGEEEL MAFAAALVEV QAAVSDRANQ V

Best Arabidopsis Sequence Match ( AT2G24840.1 )
(BLAST)

001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF

Arabidopsis Description

AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.