Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G337200.1 | Wheat | plastid | 68.91 | 95.34 |
| TraesCS7B01G240500.1 | Wheat | plastid | 68.16 | 94.3 |
| HORVU7Hr1G081190.1 | Barley | nucleus | 52.81 | 94.0 |
| TraesCS7A01G342300.1 | Wheat | plastid | 68.16 | 92.39 |
| TraesCS7B01G211300.1 | Wheat | plastid | 67.42 | 91.84 |
| TraesCS7B01G240400.1 | Wheat | plastid | 67.04 | 91.33 |
| TraesCS7D01G337000.1 | Wheat | plastid | 66.29 | 90.31 |
| TraesCS7A01G342600.1 | Wheat | nucleus, plastid | 65.92 | 89.34 |
| HORVU5Hr1G110410.2 | Barley | nucleus | 36.33 | 50.0 |
| Os12t0407000-00 | Rice | mitochondrion | 32.96 | 45.36 |
| HORVU5Hr1G110470.1 | Barley | plastid | 41.2 | 44.35 |
| Os06t0504100-00 | Rice | mitochondrion | 34.83 | 44.29 |
| KXG20143 | Sorghum | nucleus | 30.34 | 44.02 |
| KXG21744 | Sorghum | nucleus | 32.58 | 43.72 |
| Zm00001d007891_P001 | Maize | nucleus | 30.71 | 42.71 |
| Zm00001d042550_P001 | Maize | nucleus | 29.59 | 42.02 |
| EER88419 | Sorghum | nucleus | 33.33 | 41.4 |
| EER89159 | Sorghum | nucleus | 32.58 | 37.99 |
| Zm00001d046053_P001 | Maize | mitochondrion, plastid | 34.08 | 36.99 |
| Zm00001d046054_P001 | Maize | mitochondrion, plastid | 34.08 | 36.99 |
| HORVU6Hr1G081660.1 | Barley | nucleus | 24.34 | 35.91 |
| HORVU3Hr1G116800.1 | Barley | mitochondrion, nucleus, plastid | 23.97 | 35.36 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 14.61 | 26.71 |
| CDX72908 | Canola | nucleus | 19.85 | 24.88 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 19.48 | 24.76 |
| AT1G17310.2 | Thale cress | nucleus | 20.97 | 24.56 |
| Bra026674.1-P | Field mustard | nucleus | 18.73 | 24.27 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 18.73 | 23.81 |
| CDY21751 | Canola | nucleus | 18.35 | 23.79 |
| CDX81816 | Canola | nucleus | 18.35 | 23.79 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 17.6 | 22.17 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 17.6 | 22.17 |
| Bra003884.1-P | Field mustard | cytosol | 17.23 | 21.7 |
| AT1G72350.1 | Thale cress | nucleus | 17.98 | 21.43 |
| KRH47706 | Soybean | nucleus | 19.1 | 20.0 |
| Solyc11g069770.1.1 | Tomato | nucleus | 13.48 | 19.89 |
| KRH06269 | Soybean | nucleus | 17.98 | 18.9 |
| PGSC0003DMT400002920 | Potato | nucleus | 12.36 | 18.75 |
| KRH47704 | Soybean | nucleus | 18.73 | 17.42 |
| KRH47701 | Soybean | nucleus | 18.35 | 17.25 |
| HORVU3Hr1G086260.1 | Barley | nucleus | 20.22 | 16.12 |
| HORVU1Hr1G067950.1 | Barley | nucleus | 19.1 | 11.81 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A287X2R8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | EnsemblPlantsGene:HORVU7Hr1G081070 | EnsemblPlants:HORVU7Hr1G081070.1 | InterPro:IPR002100 | InterPro:IPR036879 |
| PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF339 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000B469053 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:481940654..481941907
Molecular Weight (calculated)
29670.0 Da
IEP (calculated)
10.766
GRAVY (calculated)
-0.462
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPRLQSKPG PELIRRRLFP CRDTCRDPYI PLSPFALGTV VPSHRERSSR KRERQHPPPP PPPSRFLPLV QSATMTQPPR LPSVVEQATM TLPPLGKKTK
101: GRQRRENRRV EKKESRQVTF SKRKSGLWKK AAELAVLCRA SLAIVVFSEA GKAFAFGSPS TDAVLGCADA LAPVTAADDV EWEALEALCR ETEAMGVEVA
201: AEAQRMSAVG KKVVEVQTQA GKRFWWEVDV EALGEAELPV FARALQRLRD NVRRHADKMP SAAPPLQ
101: GRQRRENRRV EKKESRQVTF SKRKSGLWKK AAELAVLCRA SLAIVVFSEA GKAFAFGSPS TDAVLGCADA LAPVTAADDV EWEALEALCR ETEAMGVEVA
201: AEAQRMSAVG KKVVEVQTQA GKRFWWEVDV EALGEAELPV FARALQRLRD NVRRHADKMP SAAPPLQ
001: MSSTKQAKGR KTKGKQKIEM KKVENYGDRM ITFSKRKTGI FKKMNELVAM CDVEVAFLIF SQPKKPYTFA HPSMKKVADR LKNPSRQEPL ERDDTRPLVE
101: AYKKRRLHDL VKKMEALEEE LAMDLEKLKL LKESRNEKKL DKMWWNFPSE GLSAKELQQR YQAMLELRDN LCDNMAHLRL GKDCGGSSSV RVGRRVSGGV
201: RLFDREA
101: AYKKRRLHDL VKKMEALEEE LAMDLEKLKL LKESRNEKKL DKMWWNFPSE GLSAKELQQR YQAMLELRDN LCDNMAHLRL GKDCGGSSSV RVGRRVSGGV
201: RLFDREA
Arabidopsis Description
AGL57AGAMOUS-like 57 [Source:UniProtKB/TrEMBL;Acc:Q9M8W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.