Factsheet for TraesCS7A01G342300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G337200.1	Wheat	plastid	93.4	95.34
TraesCS7B01G240500.1	Wheat	plastid	91.88	93.78
TraesCS7A01G342600.1	Wheat	nucleus, plastid	90.86	90.86
TraesCS1A01G061800.1	Wheat	nucleus	62.94	72.51
HORVU7Hr1G081070.1	Barley	mitochondrion, nucleus	92.39	68.16
Os12t0407000-00	Rice	mitochondrion	45.69	46.39
Os06t0504100-00	Rice	mitochondrion	47.21	44.29
TraesCS1A01G013100.1	Wheat	nucleus	33.5	34.92
TraesCS6A01G338400.1	Wheat	nucleus	36.04	28.29
TraesCS6A01G138300.1	Wheat	nucleus	27.41	27.41
TraesCS3A01G535200.1	Wheat	nucleus	35.53	26.92
GSMUA_Achr4P11900_001	Banana	nucleus	19.8	26.71
VIT_10s0003g03970.t01	Wine grape	nucleus	26.9	25.24
CDX72908	Canola	nucleus	26.9	24.88
VIT_07s0005g06590.t01	Wine grape	nucleus	25.89	24.29
Bra026674.1-P	Field mustard	nucleus	25.38	24.27
CDY21751	Canola	nucleus	24.87	23.79
CDX81816	Canola	nucleus	24.87	23.79
AT1G17310.2	Thale cress	nucleus	26.4	22.81
CDY50644	Canola	cytosol, mitochondrion, nucleus	23.86	22.17
CDX68270	Canola	cytosol, nucleus, plastid	23.86	22.17
Bra003884.1-P	Field mustard	cytosol	23.35	21.7
AT1G72350.1	Thale cress	nucleus	23.86	20.98
Solyc11g069770.1.1	Tomato	nucleus	18.78	20.44
KRH47706	Soybean	nucleus	25.38	19.61
KRH06269	Soybean	nucleus	24.37	18.9
PGSC0003DMT400002920	Potato	nucleus	16.75	18.75
KRH47704	Soybean	nucleus	24.87	17.07
TraesCS3A01G359300.1	Wheat	nucleus	27.92	16.72
KRH47701	Soybean	nucleus	23.86	16.55
TraesCS5A01G010400.1	Wheat	nucleus	21.83	14.1
TraesCS3A01G527400.1	Wheat	nucleus	24.37	12.03
TraesCS3A01G454500.1	Wheat	nucleus	18.78	11.86

Protein Annotations

EnsemblPlants:TraesCS7A01G342300.1	EnsemblPlantsGene:TraesCS7A01G342300	Gene3D:3.40.1810.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	PANTHER:PTHR11945	PANTHER:PTHR11945:SF339	PFAM:PF00319	PFscan:PS50066	PRINTS:PR00404
SEG:seg	SMART:SM00432	SUPFAM:SSF55455	MapMan:15.5.14	:	:

Description

No Description!

Coordinates

chr7A:+:502359868..502361024

Molecular Weight (calculated)

21459.9 Da

IEP (calculated)

10.232

GRAVY (calculated)

-0.358

Length

197 amino acids

Sequence
(BLAST)

001: MTQPPRLLPV VERAAMTQTP PPLGKKTKGR QRRENRRVEK KESRQVTFSK RKSGLWKKAA ELAVLCRASL AIVVFSEAGK AFAFGSPSTD AVLGCADADA
101: LAPVPAADDV EWGALEALCR QTEAMGVEVA AEAERMSAAG KKVVEVQTQA GKRFWWEADV EALGEAELPV FARALQRLRD NVRRHADKMP SAAPPLQ

Best Arabidopsis Sequence Match ( AT3G04100.1 )
(BLAST)

001: MSSTKQAKGR KTKGKQKIEM KKVENYGDRM ITFSKRKTGI FKKMNELVAM CDVEVAFLIF SQPKKPYTFA HPSMKKVADR LKNPSRQEPL ERDDTRPLVE
101: AYKKRRLHDL VKKMEALEEE LAMDLEKLKL LKESRNEKKL DKMWWNFPSE GLSAKELQQR YQAMLELRDN LCDNMAHLRL GKDCGGSSSV RVGRRVSGGV
201: RLFDREA

Arabidopsis Description

AGL57AGAMOUS-like 57 [Source:UniProtKB/TrEMBL;Acc:Q9M8W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.