Factsheet for TraesCS7A01G342600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G211300.1	Wheat	plastid	91.37	91.84
TraesCS7B01G240400.1	Wheat	plastid	90.86	91.33
TraesCS7D01G337000.1	Wheat	plastid	90.86	91.33
TraesCS7A01G342300.1	Wheat	plastid	90.86	90.86
TraesCS1A01G061800.1	Wheat	nucleus	64.47	74.27
HORVU7Hr1G081070.1	Barley	mitochondrion, nucleus	89.34	65.92
Os12t0407000-00	Rice	mitochondrion	46.19	46.91
Os06t0504100-00	Rice	mitochondrion	47.72	44.76
TraesCS1A01G013100.1	Wheat	nucleus	34.52	35.98
TraesCS6A01G338400.1	Wheat	nucleus	34.52	27.09
TraesCS6A01G138300.1	Wheat	nucleus	26.4	26.4
GSMUA_Achr4P11900_001	Banana	nucleus	19.29	26.03
TraesCS3A01G535200.1	Wheat	nucleus	34.01	25.77
CDX72908	Canola	nucleus	26.4	24.41
VIT_10s0003g03970.t01	Wine grape	nucleus	25.89	24.29
Bra026674.1-P	Field mustard	nucleus	24.87	23.79
VIT_07s0005g06590.t01	Wine grape	nucleus	24.87	23.33
CDY21751	Canola	nucleus	24.37	23.3
CDX81816	Canola	nucleus	24.37	23.3
AT1G17310.2	Thale cress	nucleus	25.89	22.37
CDY50644	Canola	cytosol, mitochondrion, nucleus	23.35	21.7
CDX68270	Canola	cytosol, nucleus, plastid	23.35	21.7
Bra003884.1-P	Field mustard	cytosol	22.84	21.23
AT1G72350.1	Thale cress	nucleus	23.35	20.54
Solyc11g069770.1.1	Tomato	nucleus	18.78	20.44
PGSC0003DMT400002920	Potato	nucleus	17.26	19.32
KRH47706	Soybean	nucleus	24.87	19.22
KRH06269	Soybean	nucleus	22.84	17.72
KRH47704	Soybean	nucleus	24.87	17.07
TraesCS3A01G359300.1	Wheat	nucleus	27.92	16.72
KRH47701	Soybean	nucleus	23.35	16.2
TraesCS5A01G010400.1	Wheat	nucleus	20.3	13.11
TraesCS3A01G454500.1	Wheat	nucleus	18.78	11.86
TraesCS3A01G527400.1	Wheat	nucleus	22.84	11.28

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	PFAM:PF00319	PRINTS:PR00404
PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF339	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	EnsemblPlantsGene:TraesCS7A01G342600	EnsemblPlants:TraesCS7A01G342600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7A:+:502621763..502623129

Molecular Weight (calculated)

21495.8 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.374

Length

197 amino acids

Sequence
(BLAST)

001: MTQPPRLLPV VERATTTLPP LGKKTKGRQR RENRRVEDKE SRQVTFSKRK SGLWKKAAEL ALLCRASLAI VVFSEAGKAF AFGSPSADAV LACADVDGDA
101: LAPVPAADDV EWEALEALCR ETGAKGLEVA AEAERMSAVG KKVVEVQTQA GKRFWWEADV EALGEAELPV FARALQRLRD NVRRHADKMP SAAPQPH

Best Arabidopsis Sequence Match ( AT5G60440.1 )
(BLAST)

001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY

Arabidopsis Description

AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.