Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026674.1-P | Field mustard | nucleus | 99.51 | 99.51 |
| CDX81816 | Canola | nucleus | 96.12 | 96.12 |
| AT1G17310.2 | Thale cress | nucleus | 70.87 | 64.04 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 47.09 | 45.75 |
| CDX72908 | Canola | nucleus | 47.09 | 45.54 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 46.6 | 45.28 |
| CDY36151 | Canola | nucleus | 17.48 | 40.91 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 24.27 | 34.25 |
| Os12t0407000-00 | Rice | mitochondrion | 30.1 | 31.96 |
| Os06t0504100-00 | Rice | mitochondrion | 30.1 | 29.52 |
| TraesCS1B01G080200.1 | Wheat | nucleus | 24.27 | 28.09 |
| TraesCS5B01G471900.1 | Wheat | mitochondrion | 22.82 | 27.17 |
| TraesCS1D01G062500.1 | Wheat | nucleus | 23.3 | 26.52 |
| KXG20143 | Sorghum | nucleus | 23.3 | 26.09 |
| Zm00001d007891_P001 | Maize | nucleus | 24.27 | 26.04 |
| TraesCS5D01G474300.1 | Wheat | mitochondrion, nucleus, plastid | 21.84 | 26.01 |
| KXG21744 | Sorghum | nucleus | 24.76 | 25.63 |
| Zm00001d042550_P001 | Maize | nucleus | 23.3 | 25.53 |
| TraesCS7D01G337200.1 | Wheat | plastid | 23.79 | 25.39 |
| HORVU7Hr1G081190.1 | Barley | nucleus | 18.45 | 25.33 |
| CDY71457 | Canola | nucleus | 15.05 | 25.0 |
| TraesCS7A01G342300.1 | Wheat | plastid | 23.79 | 24.87 |
| TraesCS7B01G240500.1 | Wheat | plastid | 23.3 | 24.87 |
| TraesCS1A01G013100.1 | Wheat | nucleus | 22.82 | 24.87 |
| EER88419 | Sorghum | nucleus | 25.73 | 24.65 |
| TraesCS7A01G342600.1 | Wheat | nucleus, plastid | 23.3 | 24.37 |
| HORVU5Hr1G110410.2 | Barley | nucleus | 22.82 | 24.23 |
| CDY69485 | Canola | nucleus | 14.56 | 24.19 |
| TraesCS7D01G337000.1 | Wheat | plastid | 22.82 | 23.98 |
| TraesCS7B01G211300.1 | Wheat | plastid | 22.82 | 23.98 |
| TraesCS1A01G061800.1 | Wheat | nucleus | 19.9 | 23.98 |
| TraesCS7B01G240400.1 | Wheat | plastid | 22.33 | 23.47 |
| CDX81713 | Canola | nucleus | 18.45 | 23.46 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 23.79 | 23.33 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 23.79 | 23.33 |
| PGSC0003DMT400002920 | Potato | nucleus | 19.9 | 23.3 |
| EER89159 | Sorghum | nucleus | 25.73 | 23.14 |
| CDY55987 | Canola | nucleus | 18.45 | 22.62 |
| Zm00001d046054_P001 | Maize | mitochondrion, plastid | 26.21 | 21.95 |
| Zm00001d046053_P001 | Maize | mitochondrion, plastid | 26.21 | 21.95 |
| Solyc11g069770.1.1 | Tomato | nucleus | 18.93 | 21.55 |
| CDX74094 | Canola | nucleus | 18.45 | 21.23 |
| CDY57614 | Canola | nucleus | 17.96 | 20.67 |
| CDX99867 | Canola | nucleus | 18.93 | 20.1 |
| CDY26304 | Canola | nucleus | 17.96 | 20.0 |
| HORVU5Hr1G110470.1 | Barley | plastid | 23.3 | 19.35 |
| CDY61930 | Canola | nucleus | 25.24 | 18.64 |
| HORVU7Hr1G081070.1 | Barley | mitochondrion, nucleus | 23.79 | 18.35 |
| CDY31547 | Canola | nucleus | 24.76 | 18.28 |
| KRH06269 | Soybean | nucleus | 22.33 | 18.11 |
| KRH47706 | Soybean | nucleus | 22.33 | 18.04 |
| CDX95426 | Canola | nucleus | 23.79 | 17.75 |
| CDY04574 | Canola | nucleus | 20.39 | 17.65 |
| CDY31718 | Canola | nucleus | 20.39 | 17.57 |
| CDY24623 | Canola | nucleus | 23.79 | 17.31 |
| KRH47701 | Soybean | nucleus | 23.79 | 17.25 |
| CDY45604 | Canola | cytosol | 4.85 | 17.24 |
| CDY36150 | Canola | cytosol | 4.85 | 17.24 |
| CDY42198 | Canola | nucleus | 22.82 | 17.03 |
| CDY46165 | Canola | nucleus | 22.82 | 16.61 |
| KRH47704 | Soybean | nucleus | 22.82 | 16.38 |
| CDY09199 | Canola | nucleus | 18.93 | 15.73 |
| CDY15761 | Canola | nucleus | 16.5 | 15.25 |
| CDY09205 | Canola | nucleus | 20.39 | 14.95 |
| CDY28567 | Canola | mitochondrion, nucleus | 17.96 | 14.92 |
| CDY09204 | Canola | nucleus | 17.96 | 14.86 |
| CDX76788 | Canola | cytosol | 5.34 | 9.73 |
| CDY34751 | Canola | cytosol | 5.34 | 9.73 |
| CDY51695 | Canola | cytosol | 4.85 | 5.1 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078G8N6 | UniProt:A0A078G8N6 | EnsemblPlants:CDY21751 | ProteinID:CDY21751 |
| ProteinID:CDY21751.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00016259001 | InterPro:IPR002100 | InterPro:IPR036879 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF164 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0004EDE1D6 | SEG:seg | : | : | : | : |
Description
BnaA09g45020DBnaA09g45020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8N6]
Coordinates
chrLK032123:+:570041..570661
Molecular Weight (calculated)
23562.6 Da
IEP (calculated)
9.926
GRAVY (calculated)
-0.690
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVRQTLPT TFLKPNEQFQ NPNVLVTQTK KELTKPRNPK TSRGRQKIEI KEIKEDSKRH VTFSKRRRGL FKKAAELSVL TGAKIAVVTF SKCGRIYSFG
101: HVDSLMDKYL RKIPVNLEVY SGDDSAEEGG RPWWERPVES VPEEELEEYI MAMSVLKDKL GKKINDMGSI VPAWPINMMG WKPQMDMQSM GDVTDGVNRC
201: RLGQNG
101: HVDSLMDKYL RKIPVNLEVY SGDDSAEEGG RPWWERPVES VPEEELEEYI MAMSVLKDKL GKKINDMGSI VPAWPINMMG WKPQMDMQSM GDVTDGVNRC
201: RLGQNG
001: MIFSSLPSRL VMKDLFMEGE RETSSMTCLT PKDSVQSPNM LVRQPKKETT TQTPKTTRGR QKIEIKKIEE ETKRQVTFSK RRRGLFKKSA ELSVLTGAKI
101: AVITFSKCDR IYRFGHVDAL IDKYLRKSPV KLEGYSGDNA ADEESRRPWW ERPVESVPEE ELEEYMAALS MLRENIGKKI VAMGNDRTVD MVPAWPINVM
201: GWKPTMDMQK LENLTDGVNR CRVGQNGD
101: AVITFSKCDR IYRFGHVDAL IDKYLRKSPV KLEGYSGDNA ADEESRRPWW ERPVESVPEE ELEEYMAALS MLRENIGKKI VAMGNDRTVD MVPAWPINVM
201: GWKPTMDMQK LENLTDGVNR CRVGQNGD
Arabidopsis Description
MADS-box transcription factor family protein [Source:TAIR;Acc:AT1G17310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.