Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G471900.1 | Wheat | mitochondrion | 95.38 | 95.38 |
| HORVU5Hr1G110410.2 | Barley | nucleus | 81.5 | 72.68 |
| HORVU5Hr1G110470.1 | Barley | plastid | 84.39 | 58.87 |
| TraesCS1D01G062500.1 | Wheat | nucleus | 57.23 | 54.7 |
| TraesCS7D01G337200.1 | Wheat | plastid | 60.12 | 53.89 |
| TraesCS7D01G337000.1 | Wheat | plastid | 58.96 | 52.04 |
| Os06t0504100-00 | Rice | mitochondrion | 57.23 | 47.14 |
| Os12t0407000-00 | Rice | mitochondrion | 50.29 | 44.85 |
| KXG21744 | Sorghum | nucleus | 50.29 | 43.72 |
| KXG20143 | Sorghum | nucleus | 45.66 | 42.93 |
| Zm00001d007891_P001 | Maize | nucleus | 43.93 | 39.58 |
| Zm00001d042550_P001 | Maize | nucleus | 41.62 | 38.3 |
| EER89159 | Sorghum | nucleus | 50.29 | 37.99 |
| EER88419 | Sorghum | nucleus | 44.51 | 35.81 |
| Zm00001d046054_P001 | Maize | mitochondrion, plastid | 45.09 | 31.71 |
| Zm00001d046053_P001 | Maize | mitochondrion, plastid | 45.09 | 31.71 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 23.7 | 28.08 |
| TraesCS6D01G319100.1 | Wheat | nucleus | 39.88 | 26.74 |
| TraesCS3D01G540700.1 | Wheat | mitochondrion, nucleus, plastid | 38.15 | 25.58 |
| Solyc11g069770.1.1 | Tomato | nucleus | 24.86 | 23.76 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 27.17 | 22.38 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 27.17 | 22.38 |
| Bra026674.1-P | Field mustard | nucleus | 26.59 | 22.33 |
| CDX81816 | Canola | nucleus | 26.59 | 22.33 |
| CDY21751 | Canola | nucleus | 26.01 | 21.84 |
| CDX72908 | Canola | nucleus | 26.59 | 21.6 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 25.43 | 20.75 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 25.43 | 20.75 |
| AT1G17310.2 | Thale cress | nucleus | 27.17 | 20.61 |
| Bra003884.1-P | Field mustard | cytosol | 24.86 | 20.28 |
| KRH47706 | Soybean | nucleus | 28.9 | 19.61 |
| KRH06269 | Soybean | nucleus | 27.75 | 18.9 |
| PGSC0003DMT400002920 | Potato | nucleus | 19.08 | 18.75 |
| AT1G72350.1 | Thale cress | nucleus | 24.28 | 18.75 |
| KRH47704 | Soybean | nucleus | 29.48 | 17.77 |
| KRH47701 | Soybean | nucleus | 28.9 | 17.61 |
| TraesCS3D01G513800.1 | Wheat | nucleus, plastid | 28.32 | 17.44 |
| TraesCS1D01G310700.1 | Wheat | nucleus | 27.75 | 15.48 |
| TraesCS3D01G532900.1 | Wheat | nucleus | 21.97 | 15.14 |
| TraesCS3D01G446900.1 | Wheat | nucleus | 27.17 | 14.24 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G474300.1 | EnsemblPlantsGene:TraesCS5D01G474300 | Gene3D:3.40.1810.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF339 | PFAM:PF00319 | PFscan:PS50066 | PRINTS:PR00404 |
| SEG:seg | SMART:SM00432 | SUPFAM:SSF55455 | MapMan:15.5.14 | : | : |
Description
No Description!
Coordinates
chr5D:-:514022560..514023323
Molecular Weight (calculated)
19322.9 Da
IEP (calculated)
9.255
GRAVY (calculated)
-0.529
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPRGTTST GRHRIEMTLR PDKNSRQVTF SKRRAGLFKK CSELAILCGA RVAAVVFSEA GNAFALGSPS MEAVLRRFDD GNDAGALVPA AEDDDREALE
101: ELYRAREATA EQVASEIKWM NTIGDKVVKA QMGRRYWWEA DVEALGEAEL PEFARALDRL RANVRRHADK LRS
101: ELYRAREATA EQVASEIKWM NTIGDKVVKA QMGRRYWWEA DVEALGEAEL PEFARALDRL RANVRRHADK LRS
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.