Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046053_P001 Maize mitochondrion, plastid 100.0 100.0
EER88419 Sorghum nucleus 73.98 84.65
TraesCS7D01G337200.1 Wheat plastid 36.59 46.63
TraesCS1D01G062500.1 Wheat nucleus 34.15 46.41
Zm00001d042550_P001 Maize nucleus 35.37 46.28
TraesCS5B01G471900.1 Wheat mitochondrion 32.52 46.24
TraesCS7B01G240500.1 Wheat plastid 35.77 45.6
TraesCS1B01G080200.1 Wheat nucleus 32.93 45.51
TraesCS7B01G240400.1 Wheat plastid 36.18 45.41
TraesCS7B01G211300.1 Wheat plastid 36.18 45.41
HORVU7Hr1G081190.1 Barley nucleus 27.64 45.33
TraesCS5D01G474300.1 Wheat mitochondrion, nucleus, plastid 31.71 45.09
Zm00001d007891_P001 Maize nucleus 34.96 44.79
TraesCS7D01G337000.1 Wheat plastid 35.37 44.39
Os06t0504100-00 Rice mitochondrion 37.8 44.29
Os12t0407000-00 Rice mitochondrion 34.55 43.81
HORVU5Hr1G110410.2 Barley nucleus 32.93 41.75
GSMUA_Achr4P11900_001 Banana nucleus 21.54 36.3
HORVU7Hr1G081070.1 Barley mitochondrion, nucleus 36.99 34.08
HORVU5Hr1G110470.1 Barley plastid 34.15 33.87
TraesCS1A01G013100.1 Wheat nucleus 25.2 32.8
Bra026674.1-P Field mustard nucleus 22.36 26.7
CDX81816 Canola nucleus 21.95 26.21
CDY21751 Canola nucleus 21.95 26.21
Zm00001d039080_P001 Maize nucleus 26.02 25.91
VIT_07s0005g06590.t01 Wine grape nucleus 21.14 24.76
VIT_10s0003g03970.t01 Wine grape nucleus 21.14 24.76
Zm00001d009628_P001 Maize nucleus 24.8 24.6
CDX72908 Canola nucleus 20.33 23.47
AT1G17310.2 Thale cress nucleus 21.54 23.25
CDY50644 Canola cytosol, mitochondrion, nucleus 19.92 23.11
CDX68270 Canola cytosol, nucleus, plastid 19.92 23.11
Zm00001d024389_P001 Maize nucleus 23.58 23.02
Bra003884.1-P Field mustard cytosol 19.51 22.64
Solyc11g069770.1.1 Tomato nucleus 16.26 22.1
AT1G72350.1 Thale cress nucleus 19.92 21.88
PGSC0003DMT400002920 Potato nucleus 13.82 19.32
Zm00001d019213_P001 Maize nucleus 19.51 17.91
Zm00001d038015_P001 Maize nucleus 20.73 16.83
KRH06269 Soybean nucleus 16.26 15.75
KRH47706 Soybean nucleus 16.26 15.69
KRH47701 Soybean nucleus 17.48 15.14
Zm00001d019214_P001 Maize nucleus 17.48 14.68
KRH47704 Soybean nucleus 16.67 14.29
Protein Annotations
EntrezGene:100282117MapMan:15.5.14Gene3D:3.40.1810.10ProteinID:AIB05163.1ProteinID:AQL03683.1ProteinID:AQL03684.1
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0046983InterPro:IPR002100
InterPro:IPR036879UniProt:K7VDU8PFAM:PF00319PRINTS:PR00404PFscan:PS50066PANTHER:PTHR11945
PANTHER:PTHR11945:SF339SMART:SM00432SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfUniParc:UPI0002221481
EnsemblPlantsGene:Zm00001d046054EnsemblPlants:Zm00001d046054_P001EnsemblPlants:Zm00001d046054_T001:::
Description
MADS-box transcription factor family protein
Coordinates
chr9:+:60326844..60327986
Molecular Weight (calculated)
27136.0 Da
IEP (calculated)
11.032
GRAVY (calculated)
-0.437
Length
246 amino acids
Sequence
(BLAST)
001: MAYIAFVLPT QIRGGPRANQ LRLQEVEQRP PPRAMVKPGK RTSRGRQKIE IRRIDNKESR QVTQCKRKGG LLKKASELHL LCGAQVAIIV FKRRDPERKE
101: VPVPPRGQRD DGGLAFAMGT PSVDHVLHRC GLLHADEGLT AIQDVGAIAA ERAVMEARAG QTEQTRALVE AEKARNDAIG QKVLQAVEVT GRRFWWEVDV
201: GVLGEAELPV FTSQLQRLRD SVRLQANKSR TSATPAGVAA PWLPLG
Best Arabidopsis Sequence Match ( AT5G60440.1 )
(BLAST)
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.