Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G061800.1 | Wheat | nucleus | 33.86 | 37.43 |
| Zm00001d007891_P001 | Maize | nucleus | 37.57 | 36.98 |
| KXG20143 | Sorghum | nucleus | 35.98 | 36.96 |
| KXG21744 | Sorghum | nucleus | 38.1 | 36.18 |
| Zm00001d042550_P001 | Maize | nucleus | 35.98 | 36.17 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 26.98 | 34.93 |
| TraesCS7A01G342600.1 | Wheat | nucleus, plastid | 35.98 | 34.52 |
| TraesCS7A01G342300.1 | Wheat | plastid | 34.92 | 33.5 |
| EER88419 | Sorghum | nucleus | 35.45 | 31.16 |
| EER89159 | Sorghum | nucleus | 37.04 | 30.57 |
| Solyc11g069770.1.1 | Tomato | nucleus | 27.51 | 28.73 |
| TraesCS6A01G138300.1 | Wheat | nucleus | 28.57 | 27.41 |
| PGSC0003DMT400002920 | Potato | nucleus | 25.4 | 27.27 |
| Zm00001d046054_P001 | Maize | mitochondrion, plastid | 32.8 | 25.2 |
| Zm00001d046053_P001 | Maize | mitochondrion, plastid | 32.8 | 25.2 |
| CDX72908 | Canola | nucleus | 26.45 | 23.47 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 25.93 | 23.33 |
| Bra026674.1-P | Field mustard | nucleus | 25.4 | 23.3 |
| CDX81816 | Canola | nucleus | 25.4 | 23.3 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 25.4 | 22.86 |
| CDY21751 | Canola | nucleus | 24.87 | 22.82 |
| TraesCS6A01G338400.1 | Wheat | nucleus | 29.63 | 22.31 |
| TraesCS3A01G535200.1 | Wheat | nucleus | 29.63 | 21.54 |
| AT1G17310.2 | Thale cress | nucleus | 25.93 | 21.49 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 23.81 | 21.23 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 23.81 | 21.23 |
| Bra003884.1-P | Field mustard | cytosol | 23.28 | 20.75 |
| AT1G72350.1 | Thale cress | nucleus | 24.34 | 20.54 |
| KRH47706 | Soybean | nucleus | 26.98 | 20.0 |
| KRH06269 | Soybean | nucleus | 25.93 | 19.29 |
| KRH47704 | Soybean | nucleus | 27.51 | 18.12 |
| KRH47701 | Soybean | nucleus | 25.4 | 16.9 |
| TraesCS3A01G359300.1 | Wheat | nucleus | 27.51 | 15.81 |
| TraesCS3A01G527400.1 | Wheat | nucleus | 26.45 | 12.53 |
| TraesCS5A01G010400.1 | Wheat | nucleus | 20.11 | 12.46 |
| TraesCS3A01G454500.1 | Wheat | nucleus | 19.58 | 11.86 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF339 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1A01G013100 | EnsemblPlants:TraesCS1A01G013100.1 | SEG:seg |
Description
No Description!
Coordinates
chr1A:+:7311700..7312269
Molecular Weight (calculated)
20753.7 Da
IEP (calculated)
9.774
GRAVY (calculated)
-0.539
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTKTKKGGT GRNKRNETKL IEDPAKRQVA FSKRRPTLFG MAGDLSALCG VHVAVVVFSR SARGNAYAFG SPSVDAVLRR YHGNVQDDDD HGDDDDDAGA
101: LAGLRSELDD TKARVEAEKK RMKKVEANVE RAMAARSTAL WWQADVEALG AAELPEFETA LRRLRDTLLR RVDALQLPLA AAPPAYMNM
101: LAGLRSELDD TKARVEAEKK RMKKVEANVE RAMAARSTAL WWQADVEALG AAELPEFETA LRRLRDTLLR RVDALQLPLA AAPPAYMNM
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.