Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G062500.1 | Wheat | nucleus | 46.73 | 51.38 |
| TraesCS5B01G471900.1 | Wheat | mitochondrion | 44.22 | 50.87 |
| TraesCS1B01G080200.1 | Wheat | nucleus | 45.23 | 50.56 |
| TraesCS5D01G474300.1 | Wheat | mitochondrion, nucleus, plastid | 43.72 | 50.29 |
| KXG20143 | Sorghum | nucleus | 44.72 | 48.37 |
| TraesCS7D01G337200.1 | Wheat | plastid | 44.72 | 46.11 |
| HORVU7Hr1G081190.1 | Barley | nucleus | 34.67 | 46.0 |
| TraesCS7B01G240500.1 | Wheat | plastid | 43.72 | 45.08 |
| TraesCS7B01G240400.1 | Wheat | plastid | 44.22 | 44.9 |
| TraesCS7B01G211300.1 | Wheat | plastid | 43.72 | 44.39 |
| TraesCS7D01G337000.1 | Wheat | plastid | 43.72 | 44.39 |
| HORVU5Hr1G110410.2 | Barley | nucleus | 42.71 | 43.81 |
| Os06t0504100-00 | Rice | mitochondrion | 45.23 | 42.86 |
| Os12t0407000-00 | Rice | mitochondrion | 40.7 | 41.75 |
| EER88419 | Sorghum | nucleus | 43.22 | 40.0 |
| EER89159 | Sorghum | nucleus | 45.73 | 39.74 |
| TraesCS1A01G013100.1 | Wheat | nucleus | 36.18 | 38.1 |
| HORVU5Hr1G110470.1 | Barley | plastid | 44.22 | 35.48 |
| HORVU7Hr1G081070.1 | Barley | mitochondrion, nucleus | 43.72 | 32.58 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 22.11 | 30.14 |
| EES19977 | Sorghum | nucleus | 33.67 | 27.35 |
| Solyc11g069770.1.1 | Tomato | nucleus | 24.12 | 26.52 |
| Bra026674.1-P | Field mustard | nucleus | 26.13 | 25.24 |
| CDY21751 | Canola | nucleus | 25.63 | 24.76 |
| CDX81816 | Canola | nucleus | 25.63 | 24.76 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 25.13 | 23.58 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 25.13 | 23.58 |
| KXG24793 | Sorghum | nucleus | 29.15 | 23.48 |
| CDX72908 | Canola | nucleus | 25.13 | 23.47 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 24.62 | 23.33 |
| Bra003884.1-P | Field mustard | cytosol | 24.62 | 23.11 |
| KXG24792 | Sorghum | nucleus | 28.64 | 23.08 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 24.12 | 22.86 |
| AT1G17310.2 | Thale cress | nucleus | 25.63 | 22.37 |
| KXG34713 | Sorghum | nucleus | 27.64 | 22.36 |
| OQU75616 | Sorghum | nucleus | 27.14 | 21.86 |
| KXG34716 | Sorghum | nucleus | 25.13 | 21.55 |
| OQU80162 | Sorghum | nucleus | 26.63 | 21.46 |
| AT1G72350.1 | Thale cress | nucleus | 24.12 | 21.43 |
| OQU80165 | Sorghum | nucleus | 22.61 | 21.23 |
| EER96088 | Sorghum | nucleus | 26.13 | 21.14 |
| PGSC0003DMT400002920 | Potato | nucleus | 18.59 | 21.02 |
| EER96091 | Sorghum | nucleus | 23.12 | 19.09 |
| KRH06269 | Soybean | nucleus | 24.12 | 18.9 |
| KRH47706 | Soybean | nucleus | 23.62 | 18.43 |
| KRH47701 | Soybean | nucleus | 25.13 | 17.61 |
| KRH47704 | Soybean | nucleus | 24.12 | 16.72 |
| KXG29537 | Sorghum | nucleus | 25.63 | 16.35 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1B6P7U6 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KXG21744 |
| ProteinID:KXG21744 | ProteinID:KXG21744.1 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF339 | SMART:SM00432 | EnsemblPlantsGene:SORBI_3009G102200 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI00081AD1F3 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:40793804..40795986
Molecular Weight (calculated)
21933.6 Da
IEP (calculated)
11.496
GRAVY (calculated)
-0.429
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSPRGAGKA SQGRRRRELV LIEDPKSRLV TFSKRKSGLL KKASELSLLC GARVAAVVFS ATGKPSAVGA PSVERVISRF TPLPSGEGDD DREREVMEVT
101: ARRAKETGAR VAEEKTRMHA VGEKVLRAAA AGGVRFWWQA DAEALGEEEL REFARKLRRL RDNVRRRADK LQLAPAASQP TTAPNILQFG FFLKKNLLL
101: ARRAKETGAR VAEEKTRMHA VGEKVLRAAA AGGVRFWWQA DAEALGEEEL REFARKLRRL RDNVRRRADK LQLAPAASQP TTAPNILQFG FFLKKNLLL
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.