Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG24793 | Sorghum | nucleus | 93.52 | 93.52 |
OQU75616 | Sorghum | nucleus | 79.76 | 79.76 |
OQU80162 | Sorghum | nucleus | 76.11 | 76.11 |
OQU80165 | Sorghum | nucleus | 64.78 | 75.47 |
Zm00001d024389_P001 | Maize | nucleus | 74.9 | 73.41 |
GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 28.74 | 31.56 |
KXG20143 | Sorghum | nucleus | 21.86 | 29.35 |
KXG21744 | Sorghum | nucleus | 23.08 | 28.64 |
GSMUA_Achr8P07230_001 | Banana | nucleus | 26.72 | 27.97 |
EER88419 | Sorghum | nucleus | 24.29 | 27.91 |
EES19977 | Sorghum | nucleus | 27.53 | 27.76 |
KXG34713 | Sorghum | nucleus | 27.13 | 27.24 |
KXG34716 | Sorghum | nucleus | 23.08 | 24.57 |
EER89159 | Sorghum | nucleus | 22.67 | 24.45 |
EER96088 | Sorghum | nucleus | 23.48 | 23.58 |
EER96091 | Sorghum | nucleus | 21.46 | 21.99 |
KXG29537 | Sorghum | nucleus | 23.48 | 18.59 |
Protein Annotations
MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1B6PGH4 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
InterPro:IPR036879 | EnsemblPlants:KXG24792 | ProteinID:KXG24792 | ProteinID:KXG24792.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF164 | SMART:SM00432 | EnsemblPlantsGene:SORBI_3007G086100 |
SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00081AC51A | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:-:11235908..11236651
Molecular Weight (calculated)
26950.6 Da
IEP (calculated)
8.609
GRAVY (calculated)
-0.464
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKGKSTKGR QRIEMKRIKG EEARQVCFSK RRPSLFKKAS ELSTLCGAEV AVVTFSPGGK CLSFGHPSTL SVADRFLAAH TLDGLTIGSD SHGTQGLTGS
101: SQEMNQQVME LQKLMETEKR RKEMLVDAMD RESGGPVMQL LNANVSALGI HELEQLRKEL CMVQDMVKEK SHEMLQDAMQ TRRLPPQPPM HMAAMPWQVL
201: SGDQRAGTMY TTVPSSSSGP CEGLHASSLL HCSHGGLGNY SNGQYGG
101: SQEMNQQVME LQKLMETEKR RKEMLVDAMD RESGGPVMQL LNANVSALGI HELEQLRKEL CMVQDMVKEK SHEMLQDAMQ TRRLPPQPPM HMAAMPWQVL
201: SGDQRAGTMY TTVPSSSSGP CEGLHASSLL HCSHGGLGNY SNGQYGG
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.