Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96088 | Sorghum | nucleus | 71.14 | 71.14 |
| Zm00001d019213_P001 | Maize | nucleus | 76.83 | 70.52 |
| KXG34716 | Sorghum | nucleus | 66.26 | 70.26 |
| EER96091 | Sorghum | nucleus | 56.5 | 57.68 |
| EES19977 | Sorghum | nucleus | 36.59 | 36.73 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 31.3 | 34.22 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 32.11 | 33.47 |
| OQU80165 | Sorghum | nucleus | 25.61 | 29.72 |
| KXG21744 | Sorghum | nucleus | 22.36 | 27.64 |
| KXG24792 | Sorghum | nucleus | 27.24 | 27.13 |
| OQU75616 | Sorghum | nucleus | 27.24 | 27.13 |
| OQU80162 | Sorghum | nucleus | 26.83 | 26.72 |
| KXG24793 | Sorghum | nucleus | 26.02 | 25.91 |
| KXG20143 | Sorghum | nucleus | 19.11 | 25.54 |
| EER88419 | Sorghum | nucleus | 19.92 | 22.79 |
| EER89159 | Sorghum | nucleus | 19.51 | 20.96 |
| KXG29537 | Sorghum | nucleus | 24.8 | 19.55 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1B6Q9V7 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | EnsemblPlants:KXG34713 | ProteinID:KXG34713 | ProteinID:KXG34713.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF361 | SMART:SM00432 | EnsemblPlantsGene:SORBI_3002G080600 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00081AB2CD | : | : |
Description
hypothetical protein
Coordinates
chr2:+:8502671..8503411
Molecular Weight (calculated)
27117.0 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.529
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRRKTEIKH IENEDARKVC FSKRRQGLFK KASELSILCG ATVGSVVFSN SGRSFSFGHP SINDVADRFL NSVAPVDFAS GGASHDNSGA VMDTVHRLNM
101: ELSELQQALD SENKKKERLK EAIEKEKGQP MMQWLNANVL ELGLAELQEF QKCLEAVDIA VKEKTNQILA EARQTTQGSV PQLPMEIPST SRYQFGQHIS
201: ANSMAFTDPR SSNGFTDGFE VNDPLRSGGL QDVCGLGNFL NNQNHG
101: ELSELQQALD SENKKKERLK EAIEKEKGQP MMQWLNANVL ELGLAELQEF QKCLEAVDIA VKEKTNQILA EARQTTQGSV PQLPMEIPST SRYQFGQHIS
201: ANSMAFTDPR SSNGFTDGFE VNDPLRSGGL QDVCGLGNFL NNQNHG
001: MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
Arabidopsis Description
AGL29AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.