Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G080200.1 | Wheat | nucleus | 81.33 | 68.54 |
| TraesCS1D01G062500.1 | Wheat | nucleus | 81.33 | 67.4 |
| TraesCS1A01G061800.1 | Wheat | nucleus | 69.33 | 60.82 |
| HORVU7Hr1G081070.1 | Barley | mitochondrion, nucleus | 94.0 | 52.81 |
| HORVU5Hr1G110410.2 | Barley | nucleus | 52.67 | 40.72 |
| Os12t0407000-00 | Rice | mitochondrion | 48.67 | 37.63 |
| KXG20143 | Sorghum | nucleus | 44.67 | 36.41 |
| Os06t0504100-00 | Rice | mitochondrion | 50.0 | 35.71 |
| Zm00001d042550_P001 | Maize | nucleus | 44.67 | 35.64 |
| KXG21744 | Sorghum | nucleus | 46.0 | 34.67 |
| Zm00001d007891_P001 | Maize | nucleus | 44.0 | 34.38 |
| HORVU5Hr1G110470.1 | Barley | plastid | 54.0 | 32.66 |
| EER88419 | Sorghum | nucleus | 46.67 | 32.56 |
| EER89159 | Sorghum | nucleus | 47.33 | 31.0 |
| HORVU3Hr1G116800.1 | Barley | mitochondrion, nucleus, plastid | 36.67 | 30.39 |
| HORVU6Hr1G081660.1 | Barley | nucleus | 36.67 | 30.39 |
| Zm00001d046053_P001 | Maize | mitochondrion, plastid | 45.33 | 27.64 |
| Zm00001d046054_P001 | Maize | mitochondrion, plastid | 45.33 | 27.64 |
| GSMUA_Achr4P11900_001 | Banana | nucleus | 22.67 | 23.29 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 28.0 | 20.0 |
| Solyc11g069770.1.1 | Tomato | nucleus | 23.33 | 19.34 |
| CDX72908 | Canola | nucleus | 27.33 | 19.25 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 26.67 | 19.05 |
| CDY21751 | Canola | nucleus | 25.33 | 18.45 |
| Bra026674.1-P | Field mustard | nucleus | 25.33 | 18.45 |
| CDX81816 | Canola | nucleus | 24.67 | 17.96 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 25.33 | 17.92 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 25.33 | 17.92 |
| PGSC0003DMT400002920 | Potato | nucleus | 20.67 | 17.61 |
| Bra003884.1-P | Field mustard | cytosol | 24.67 | 17.45 |
| AT1G17310.2 | Thale cress | nucleus | 26.0 | 17.11 |
| AT1G72350.1 | Thale cress | nucleus | 25.33 | 16.96 |
| KRH47706 | Soybean | nucleus | 26.67 | 15.69 |
| KRH06269 | Soybean | nucleus | 25.33 | 14.96 |
| KRH47704 | Soybean | nucleus | 27.33 | 14.29 |
| KRH47701 | Soybean | nucleus | 25.33 | 13.38 |
| HORVU3Hr1G086260.1 | Barley | nucleus | 29.33 | 13.13 |
| HORVU1Hr1G067950.1 | Barley | nucleus | 28.67 | 9.95 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A287X2Q9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | EnsemblPlantsGene:HORVU7Hr1G081190 | EnsemblPlants:HORVU7Hr1G081190.1 | InterPro:IPR002100 | InterPro:IPR036879 |
| PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF339 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000B47021F | : | : |
Description
No Description!
Coordinates
chrchr7H:+:482150460..482151105
Molecular Weight (calculated)
16223.3 Da
IEP (calculated)
6.664
GRAVY (calculated)
-0.319
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQPPLGKKT KGRQRRENRR VEDKESRQVT FSKRKSGLWK KAAELAILCR ASLAIVVFSE AGKAFAFGSP STDAVLGCAD VDGDGALAPV PAADDVEWEA
101: LEALCRETEA MGVEVAAEAQ RMSAVGKKVV EVQTQAGKRF WWEADVEALG
101: LEALCRETEA MGVEVAAEAQ RMSAVGKKVV EVQTQAGKRF WWEADVEALG
001: MVKKTLGRRK VEIVKMTKES NLQVTFSKRK AGLFKKASEF CTLCDAKIAM IVFSPAGKVF SFGHPNVDVL LDHFRGCVVG HNNTNLDESY TKLHVQMLNK
101: SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
201: DQNGMTTNPT QTLLFGFDIM NRTPGV
101: SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
201: DQNGMTTNPT QTLLFGFDIM NRTPGV
Arabidopsis Description
AGL23Agamous-like MADS-box protein AGL23 [Source:UniProtKB/Swiss-Prot;Acc:O80807]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.