Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022446.1-P | Field mustard | cytosol | 98.98 | 98.98 |
| CDY24623 | Canola | nucleus | 91.33 | 63.25 |
| CDY46165 | Canola | nucleus | 83.67 | 57.95 |
| CDX95426 | Canola | nucleus | 60.2 | 42.75 |
| CDY42198 | Canola | nucleus | 60.2 | 42.75 |
| CDY45604 | Canola | cytosol | 10.2 | 34.48 |
| CDY36150 | Canola | cytosol | 9.69 | 32.76 |
| CDX76788 | Canola | cytosol | 15.31 | 26.55 |
| CDY34751 | Canola | cytosol | 14.8 | 25.66 |
| KRH32908 | Soybean | nucleus | 10.71 | 23.33 |
| CDY09199 | Canola | nucleus | 28.57 | 22.58 |
| CDY28567 | Canola | mitochondrion, nucleus | 28.57 | 22.58 |
| CDY09204 | Canola | nucleus | 28.57 | 22.49 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 25.0 | 21.88 |
| CDY09205 | Canola | nucleus | 30.1 | 21.0 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 22.45 | 20.66 |
| PGSC0003DMT400013136 | Potato | nucleus | 20.41 | 20.3 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 21.94 | 20.09 |
| CDY31547 | Canola | nucleus | 28.57 | 20.07 |
| CDY61930 | Canola | nucleus | 28.06 | 19.71 |
| CDY55987 | Canola | nucleus | 14.29 | 16.67 |
| KRH35628 | Soybean | nucleus | 20.41 | 16.19 |
| CDX81713 | Canola | nucleus | 13.27 | 16.05 |
| KRG91148 | Soybean | nucleus | 19.39 | 15.7 |
| CDY15761 | Canola | nucleus | 17.86 | 15.7 |
| KRG91147 | Soybean | nucleus | 18.88 | 15.48 |
| CDY04574 | Canola | nucleus | 18.37 | 15.13 |
| KRH72149 | Soybean | mitochondrion | 12.76 | 14.79 |
| CDY31718 | Canola | nucleus | 17.86 | 14.64 |
| KRH72042 | Soybean | extracellular | 7.65 | 14.56 |
| KRH32912 | Soybean | nucleus | 12.76 | 14.45 |
| KRH32917 | Soybean | nucleus | 12.76 | 14.04 |
| KRH32910 | Soybean | nucleus | 12.76 | 14.04 |
| KRH32946 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32916 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32915 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32909 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32904 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32900 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32901 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32873 | Soybean | nucleus | 14.8 | 13.36 |
| KRG88448 | Soybean | nucleus | 11.73 | 13.29 |
| KRG91149 | Soybean | mitochondrion | 16.33 | 13.22 |
| KRH35627 | Soybean | mitochondrion | 16.33 | 12.96 |
| KRH72146 | Soybean | nucleus | 12.24 | 12.63 |
| KRH28025 | Soybean | nucleus | 10.71 | 12.5 |
| CDY71457 | Canola | nucleus | 7.65 | 12.1 |
| CDY69485 | Canola | nucleus | 7.65 | 12.1 |
| KRH71935 | Soybean | nucleus | 10.71 | 11.86 |
| KRH35629 | Soybean | nucleus | 12.76 | 11.85 |
| CDX74094 | Canola | nucleus | 10.71 | 11.73 |
| CDY57614 | Canola | nucleus | 10.71 | 11.73 |
| KRH22644 | Soybean | nucleus | 8.16 | 11.51 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 11.73 | 9.43 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 14.8 | 8.36 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 10.2 | 8.13 |
| CDX72908 | Canola | nucleus | 7.65 | 7.04 |
| CDX99867 | Canola | nucleus | 6.63 | 6.7 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 7.14 | 6.6 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 7.14 | 6.6 |
| KRH33030 | Soybean | nucleus | 3.57 | 6.19 |
| CDY26304 | Canola | nucleus | 5.61 | 5.95 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 3.06 | 5.83 |
| CDX81816 | Canola | nucleus | 5.61 | 5.34 |
| CDY21751 | Canola | nucleus | 5.1 | 4.85 |
| CDY36151 | Canola | nucleus | 1.53 | 3.41 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY51695 | EnsemblPlantsGene:GSBRNA2T00004035001 | ncoils:Coil | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | ProteinID:CDY51695 |
| ProteinID:CDY51695.1 | SEG:seg | UniParc:UPI0004EDEA44 | UniProt:A0A078IKW2 | MapMan:35.1 | : |
Description
BnaA05g36820DBnaA05g36820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKW2]
Coordinates
chrLK033019:-:60798..61839
Molecular Weight (calculated)
22907.5 Da
IEP (calculated)
6.025
GRAVY (calculated)
-0.964
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLSEARRNA IVQDLNNHLT QVTEEFEIEK KRTEDLKQKR KNSNMRENWW EEPIEELNLS QLTEFKCGLE KLRKTVTTEA CKNFQAIVPR HNFYGGSSNN
101: STFGICDDHT DNIDTDLDLY NHQRMVATNT FACNQHNRMV PYHITSPFGN IANSNIIEGF APEYNQNPNQ FCFKQEQMSE CDQHSAHPPR FGHGYY
101: STFGICDDHT DNIDTDLDLY NHQRMVATNT FACNQHNRMV PYHITSPFGN IANSNIIEGF APEYNQNPNQ FCFKQEQMSE CDQHSAHPPR FGHGYY
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.