Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51695 | Canola | cytosol | 98.98 | 98.98 |
| Bra022434.1-P | Field mustard | nucleus | 84.69 | 58.66 |
| Bra038225.1-P | Field mustard | nucleus | 60.2 | 45.21 |
| Bra020245.1-P | Field mustard | nucleus | 23.47 | 32.86 |
| Bra020246.1-P | Field mustard | cytosol | 27.04 | 31.18 |
| KRH32908 | Soybean | nucleus | 10.71 | 23.33 |
| Bra020242.1-P | Field mustard | nucleus | 28.06 | 22.18 |
| Bra020247.1-P | Field mustard | cytosol | 30.1 | 21.93 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 25.0 | 21.88 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 22.45 | 20.66 |
| PGSC0003DMT400013136 | Potato | nucleus | 20.41 | 20.3 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 21.94 | 20.09 |
| Bra002480.1-P | Field mustard | nucleus | 28.57 | 20.07 |
| Bra026764.1-P | Field mustard | nucleus | 14.29 | 16.67 |
| KRH35628 | Soybean | nucleus | 20.41 | 16.19 |
| Bra032057.1-P | Field mustard | nucleus | 14.8 | 16.11 |
| KRG91148 | Soybean | nucleus | 19.39 | 15.7 |
| KRG91147 | Soybean | nucleus | 18.88 | 15.48 |
| Bra011938.1-P | Field mustard | nucleus | 18.37 | 15.13 |
| Bra007829.1-P | Field mustard | nucleus | 15.82 | 14.98 |
| KRH72149 | Soybean | mitochondrion | 12.76 | 14.79 |
| KRH72042 | Soybean | extracellular | 7.65 | 14.56 |
| KRH32912 | Soybean | nucleus | 12.76 | 14.45 |
| KRH32917 | Soybean | nucleus | 12.76 | 14.04 |
| KRH32910 | Soybean | nucleus | 12.76 | 14.04 |
| KRH32901 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32946 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32916 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32915 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32909 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32904 | Soybean | nucleus | 12.24 | 13.87 |
| KRH32900 | Soybean | nucleus | 12.24 | 13.87 |
| KRG91149 | Soybean | mitochondrion | 16.84 | 13.64 |
| KRH32873 | Soybean | nucleus | 14.8 | 13.36 |
| KRH35627 | Soybean | mitochondrion | 16.84 | 13.36 |
| KRG88448 | Soybean | nucleus | 11.73 | 13.29 |
| KRH72146 | Soybean | nucleus | 12.24 | 12.63 |
| KRH28025 | Soybean | nucleus | 10.71 | 12.5 |
| Bra035685.1-P | Field mustard | nucleus | 18.37 | 12.29 |
| KRH71935 | Soybean | nucleus | 10.71 | 11.86 |
| KRH35629 | Soybean | nucleus | 12.76 | 11.85 |
| Bra001209.1-P | Field mustard | nucleus | 10.71 | 11.73 |
| KRH22644 | Soybean | nucleus | 8.16 | 11.51 |
| Bra021910.1-P | Field mustard | nucleus | 10.2 | 10.99 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 12.24 | 9.84 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 14.8 | 8.36 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 10.2 | 8.13 |
| Bra003884.1-P | Field mustard | cytosol | 7.14 | 6.6 |
| KRH33030 | Soybean | nucleus | 3.57 | 6.19 |
| Bra032347.1-P | Field mustard | nucleus | 5.61 | 5.91 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 3.06 | 5.83 |
| Bra026674.1-P | Field mustard | nucleus | 5.61 | 5.34 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
Description
AT5G60440 (E=2e-036) AGL62 | AGL62 (Agamous-like 62); DNA binding / transcription factor
Coordinates
chrA05:-:17615162..17616221
Molecular Weight (calculated)
22848.5 Da
IEP (calculated)
5.790
GRAVY (calculated)
-0.927
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLSEARRNA IVQDLNNHLT QVTEEFEIEK KRTEDLKQKR KNSNMRENWW EEPIEELNLS QLTEFKCGLE KLRKTVTTEA CKNFQAIVPR HNFYGGSSNN
101: STFGICDDHT DNIDTDLDLY NHQRMVATNT FACNQHNMMV PYHITSPFGN IANSNIIEGF APEYNQNPNQ LCFKQEQMSE CDQHSAHPPR FGHGYY
101: STFGICDDHT DNIDTDLDLY NHQRMVATNT FACNQHNMMV PYHITSPFGN IANSNIIEGF APEYNQNPNQ LCFKQEQMSE CDQHSAHPPR FGHGYY
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.