Factsheet for Bra026764.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55987	Canola	nucleus	100.0	100.0
CDX81713	Canola	nucleus	93.45	96.91
Bra032057.1-P	Field mustard	nucleus	51.79	48.33
Bra007829.1-P	Field mustard	nucleus	51.19	41.55
PGSC0003DMT400094816	Potato	golgi, nucleus, plastid	44.05	33.48
VIT_03s0088g00590.t01	Wine grape	nucleus	41.67	32.71
KRH35626	Soybean	nucleus	43.45	32.3
PGSC0003DMT400094062	Potato	nucleus	38.69	31.86
KRG91150	Soybean	nucleus	42.86	31.86
VIT_03s0088g00610.t01	Wine grape	cytosol	38.1	29.22
Bra020242.1-P	Field mustard	nucleus	41.67	28.23
Bra001209.1-P	Field mustard	nucleus	29.76	27.93
Bra002480.1-P	Field mustard	nucleus	44.05	26.52
Bra021910.1-P	Field mustard	nucleus	28.57	26.37
Bra022434.1-P	Field mustard	nucleus	43.45	25.8
Bra011938.1-P	Field mustard	nucleus	35.71	25.21
Bra020247.1-P	Field mustard	cytosol	39.29	24.54
Bra038225.1-P	Field mustard	nucleus	38.1	24.52
GSMUA_Achr5P01940_001	Banana	nucleus	29.76	20.49
Bra035685.1-P	Field mustard	nucleus	35.71	20.48
Bra032347.1-P	Field mustard	nucleus	22.62	20.43
Bra026674.1-P	Field mustard	nucleus	23.21	18.93
GSMUA_Achr4P28260_001	Banana	nucleus	27.38	18.7
Bra020245.1-P	Field mustard	nucleus	14.29	17.14
Bra003884.1-P	Field mustard	cytosol	21.43	16.98
Bra020246.1-P	Field mustard	cytosol	16.07	15.88
Bra022446.1-P	Field mustard	cytosol	16.67	14.29
GSMUA_Achr5P01990_001	Banana	nucleus	28.57	13.83

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra026764	EnsemblPlants:Bra026764.1	EnsemblPlants:Bra026764.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	UniProt:M4EDA4	InterPro:MADS_MEF2-like	PFAM:PF00319
PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF185	SMART:SM00432	SUPFAM:SSF55455
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0002542CC2	SEG:seg	:	:

Description

AT2G24840 (E=2e-028) AGL61, DIA | AGL61 (AGAMOUS-LIKE 61); DNA binding / transcription factor

Coordinates

chrA09:-:33608672..33609178

Molecular Weight (calculated)

19236.2 Da

IEP (calculated)

9.734

GRAVY (calculated)

-0.506

Length

168 amino acids

Sequence
(BLAST)

001: MAKIEKESHR QVAFSKRRAG LFKKASELCT LCGVEVAIIV FSPAKKPFSF GHPSVYSVLD RYRNNTSFQQ QSQPRENTAT RSELSLVLSQ LEEEKKKGEE
101: MRKASEMAKW SVDEMSLLQL QEMRYALEEL RKTMVVPPPS YMNSMSTGFS CIYNSSYVHA SSRVTYKL

Best Arabidopsis Sequence Match ( AT2G24840.1 )
(BLAST)

001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF

Arabidopsis Description

AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.