Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42198 | Canola | nucleus | 99.23 | 93.84 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 14.94 | 69.64 |
| Bra022434.1-P | Field mustard | nucleus | 67.05 | 61.84 |
| Bra022446.1-P | Field mustard | cytosol | 45.21 | 60.2 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 19.92 | 50.49 |
| KRH22644 | Soybean | nucleus | 24.52 | 46.04 |
| KRH72042 | Soybean | extracellular | 17.62 | 44.66 |
| PGSC0003DMT400013136 | Potato | nucleus | 32.95 | 43.65 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 36.78 | 42.86 |
| KRH72149 | Soybean | mitochondrion | 27.59 | 42.6 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 34.48 | 42.25 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 34.1 | 41.59 |
| Bra032057.1-P | Field mustard | nucleus | 27.97 | 40.56 |
| KRH32901 | Soybean | nucleus | 26.44 | 39.88 |
| KRH32912 | Soybean | nucleus | 26.44 | 39.88 |
| Bra020247.1-P | Field mustard | cytosol | 40.61 | 39.41 |
| KRH32917 | Soybean | nucleus | 26.44 | 38.76 |
| KRH32910 | Soybean | nucleus | 26.44 | 38.76 |
| KRH32946 | Soybean | nucleus | 25.67 | 38.73 |
| KRH32915 | Soybean | nucleus | 25.67 | 38.73 |
| KRG88448 | Soybean | nucleus | 25.67 | 38.73 |
| KRH32909 | Soybean | nucleus | 25.67 | 38.73 |
| KRH32900 | Soybean | nucleus | 25.29 | 38.15 |
| KRH32904 | Soybean | nucleus | 25.29 | 38.15 |
| KRH32916 | Soybean | nucleus | 25.29 | 38.15 |
| Bra026764.1-P | Field mustard | nucleus | 24.52 | 38.1 |
| Bra002480.1-P | Field mustard | nucleus | 39.85 | 37.28 |
| KRG91147 | Soybean | nucleus | 33.72 | 36.82 |
| KRG91148 | Soybean | nucleus | 34.1 | 36.78 |
| Bra020242.1-P | Field mustard | nucleus | 34.48 | 36.29 |
| KRH71935 | Soybean | nucleus | 24.52 | 36.16 |
| Bra007829.1-P | Field mustard | nucleus | 27.97 | 35.27 |
| KRH35628 | Soybean | nucleus | 33.33 | 35.22 |
| KRH33030 | Soybean | nucleus | 14.94 | 34.51 |
| Bra011938.1-P | Field mustard | nucleus | 31.42 | 34.45 |
| KRG91149 | Soybean | mitochondrion | 31.8 | 34.3 |
| KRH35627 | Soybean | mitochondrion | 32.18 | 34.01 |
| KRH28025 | Soybean | nucleus | 21.46 | 33.33 |
| KRH32873 | Soybean | nucleus | 27.2 | 32.72 |
| Bra020245.1-P | Field mustard | nucleus | 16.48 | 30.71 |
| Bra020246.1-P | Field mustard | cytosol | 19.92 | 30.59 |
| Bra021910.1-P | Field mustard | nucleus | 21.07 | 30.22 |
| Bra001209.1-P | Field mustard | nucleus | 19.92 | 29.05 |
| KRH35629 | Soybean | nucleus | 21.07 | 26.07 |
| KRH72146 | Soybean | nucleus | 18.39 | 25.26 |
| Bra035685.1-P | Field mustard | nucleus | 27.97 | 24.91 |
| KRH32908 | Soybean | nucleus | 8.43 | 24.44 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 21.84 | 23.36 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 20.69 | 21.95 |
| Bra032347.1-P | Field mustard | nucleus | 13.79 | 19.35 |
| Bra026674.1-P | Field mustard | nucleus | 14.94 | 18.93 |
| Bra003884.1-P | Field mustard | cytosol | 15.33 | 18.87 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 23.75 | 17.87 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra038225 | EnsemblPlants:Bra038225.1 | EnsemblPlants:Bra038225.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | UniProt:M4FAW0 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002544AD6 |
| SEG:seg | : | : | : | : | : |
Description
AT5G60440 (E=3e-069) AGL62 | AGL62 (Agamous-like 62); DNA binding / transcription factor
Coordinates
chrA01:-:21479827..21481044
Molecular Weight (calculated)
30315.3 Da
IEP (calculated)
6.986
GRAVY (calculated)
-0.920
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNENNLQVT FSKRRSGLFK KASELCTLCG AEIVVIVFSP GRKVFSFGHP NVDVVIDRFL KINPHHPHQN NNLQLNEACL NAVVQDLNNH LTQVTEQLEE
101: EKKRNEDLKQ KRKDDKKSEN WWEDPIEGFN LRQLTEFKCG LENFKKTVTT EASKYLQATG HNFYFGSSSN ATFGIFDNDG NTNSELDLFN HRRLVDMNTF
201: SGNHQNMIIP HPSTTPYGNN VIERFAPEHN QNQSQYCFKQ ERASECDRQP DHPPHYRHEY C
101: EKKRNEDLKQ KRKDDKKSEN WWEDPIEGFN LRQLTEFKCG LENFKKTVTT EASKYLQATG HNFYFGSSSN ATFGIFDNDG NTNSELDLFN HRRLVDMNTF
201: SGNHQNMIIP HPSTTPYGNN VIERFAPEHN QNQSQYCFKQ ERASECDRQP DHPPHYRHEY C
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.