Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 26.62 | 66.07 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 41.73 | 56.31 |
| KRH32912 | Soybean | nucleus | 53.24 | 42.77 |
| KRH32910 | Soybean | nucleus | 53.96 | 42.13 |
| KRH32946 | Soybean | nucleus | 51.8 | 41.62 |
| KRH32909 | Soybean | nucleus | 51.8 | 41.62 |
| KRH32901 | Soybean | nucleus | 51.8 | 41.62 |
| KRH32904 | Soybean | nucleus | 51.08 | 41.04 |
| KRH32915 | Soybean | nucleus | 51.08 | 41.04 |
| KRH32900 | Soybean | nucleus | 51.08 | 41.04 |
| KRH32917 | Soybean | nucleus | 52.52 | 41.01 |
| KRG88448 | Soybean | nucleus | 50.36 | 40.46 |
| KRH32916 | Soybean | nucleus | 48.92 | 39.31 |
| KRG91147 | Soybean | nucleus | 66.19 | 38.49 |
| KRG91149 | Soybean | mitochondrion | 66.19 | 38.02 |
| KRG91148 | Soybean | nucleus | 64.75 | 37.19 |
| KRH35627 | Soybean | mitochondrion | 64.03 | 36.03 |
| KRH35628 | Soybean | nucleus | 62.59 | 35.22 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 53.24 | 34.74 |
| KRH33030 | Soybean | nucleus | 28.06 | 34.51 |
| KRH71935 | Soybean | nucleus | 43.88 | 34.46 |
| CDY69485 | Canola | nucleus | 30.22 | 33.87 |
| KRH72149 | Soybean | mitochondrion | 41.01 | 33.73 |
| CDY71457 | Canola | nucleus | 29.5 | 33.06 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 50.36 | 32.71 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 52.52 | 32.59 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 37.41 | 32.3 |
| KRH28025 | Soybean | nucleus | 38.85 | 32.14 |
| PGSC0003DMT400013136 | Potato | nucleus | 44.6 | 31.47 |
| KRH02077 | Soybean | nucleus | 39.57 | 30.56 |
| KRG91150 | Soybean | nucleus | 48.92 | 30.09 |
| KRH32873 | Soybean | nucleus | 46.76 | 29.95 |
| KRH35626 | Soybean | nucleus | 48.2 | 29.65 |
| KRH72042 | Soybean | extracellular | 21.58 | 29.13 |
| KRH60217 | Soybean | nucleus | 36.69 | 28.81 |
| KRH35629 | Soybean | nucleus | 40.29 | 26.54 |
| KRG91151 | Soybean | nucleus | 38.13 | 26.5 |
| KRH45604 | Soybean | nucleus | 35.97 | 26.45 |
| CDX95426 | Canola | nucleus | 51.08 | 25.72 |
| CDY42198 | Canola | nucleus | 51.08 | 25.72 |
| KRH41503 | Soybean | nucleus | 29.5 | 25.62 |
| KRG99424 | Soybean | nucleus | 33.09 | 25.27 |
| Bra011938.1-P | Field mustard | nucleus | 43.17 | 25.21 |
| CDY04574 | Canola | nucleus | 43.17 | 25.21 |
| CDY24623 | Canola | nucleus | 51.08 | 25.09 |
| AT5G60440.1 | Thale cress | nucleus | 53.24 | 24.75 |
| CDY46165 | Canola | nucleus | 50.36 | 24.73 |
| Bra022434.1-P | Field mustard | nucleus | 50.36 | 24.73 |
| Bra038225.1-P | Field mustard | nucleus | 46.04 | 24.52 |
| KRH32908 | Soybean | nucleus | 15.83 | 24.44 |
| Bra002480.1-P | Field mustard | nucleus | 48.92 | 24.37 |
| CDY31547 | Canola | nucleus | 48.92 | 24.37 |
| KRH60216 | Soybean | nucleus | 32.37 | 24.32 |
| CDY15761 | Canola | nucleus | 38.85 | 24.22 |
| AT4G36590.1 | Thale cress | nucleus | 43.17 | 24.19 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 42.45 | 24.18 |
| CDY61930 | Canola | nucleus | 48.2 | 24.01 |
| AT1G65360.1 | Thale cress | nucleus | 38.85 | 23.89 |
| CDY31718 | Canola | nucleus | 40.29 | 23.43 |
| AT1G01530.1 | Thale cress | nucleus | 39.57 | 22.27 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 38.85 | 21.95 |
| KRH72146 | Soybean | nucleus | 29.5 | 21.58 |
| CDY09199 | Canola | nucleus | 37.41 | 20.97 |
| CDY09205 | Canola | nucleus | 41.01 | 20.28 |
| Bra020242.1-P | Field mustard | nucleus | 35.97 | 20.16 |
| CDY28567 | Canola | mitochondrion, nucleus | 35.25 | 19.76 |
| CDY09204 | Canola | nucleus | 35.25 | 19.68 |
| Bra020247.1-P | Field mustard | cytosol | 36.69 | 18.96 |
| KRH47706 | Soybean | nucleus | 32.37 | 17.65 |
| KRH06269 | Soybean | nucleus | 30.22 | 16.54 |
| Bra035685.1-P | Field mustard | nucleus | 34.53 | 16.38 |
| KRH47701 | Soybean | nucleus | 33.09 | 16.2 |
| KRH47704 | Soybean | nucleus | 32.37 | 15.68 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 38.85 | 15.56 |
| CDY51695 | Canola | cytosol | 11.51 | 8.16 |
| Bra022446.1-P | Field mustard | cytosol | 11.51 | 8.16 |
| Bra020245.1-P | Field mustard | nucleus | 7.19 | 7.14 |
| Bra020246.1-P | Field mustard | cytosol | 6.47 | 5.29 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0R0H9T9 | EMBL:ACUP02008423 | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G313800 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KRH22644 | ProteinID:KRH22644 | ProteinID:KRH22644.1 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0006EE1653 | : |
Description
hypothetical protein
Coordinates
chr13:+:40919880..40920390
Molecular Weight (calculated)
15707.0 Da
IEP (calculated)
10.353
GRAVY (calculated)
-0.516
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSEAKKSR GRQRIEIKKM CNEANLQVTF SKRRSGLFKK ASELSTLCGA SVALVVFSPG KKVFSFGHPS VDGVIERYLT QGPTPLMDVQ RMAELEAERK
101: RAQELSGKER ETEAHLWWAR PVEGMISIDN LYKLKKAFE
101: RAQELSGKER ETEAHLWWAR PVEGMISIDN LYKLKKAFE
001: MVKKTLGRRK VEIVKMTKES NLQVTFSKRK AGLFKKASEF CTLCDAKIAM IVFSPAGKVF SFGHPNVDVL LDHFRGCVVG HNNTNLDESY TKLHVQMLNK
101: SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
201: DQNGMTTNPT QTLLFGFDIM NRTPGV
101: SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
201: DQNGMTTNPT QTLLFGFDIM NRTPGV
Arabidopsis Description
AGL23Agamous-like MADS-box protein AGL23 [Source:UniProtKB/Swiss-Prot;Acc:O80807]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.