Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98150 | Soybean | mitochondrion, nucleus | 64.65 | 76.65 |
| KRH72060 | Soybean | nucleus | 56.06 | 64.91 |
| KRH30113 | Soybean | nucleus | 54.55 | 63.16 |
| KRG89836 | Soybean | nucleus | 46.46 | 61.74 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 11.62 | 56.1 |
| KRG88915 | Soybean | mitochondrion, nucleus | 58.08 | 55.56 |
| KRG98152 | Soybean | nucleus | 52.02 | 54.21 |
| KRH72066 | Soybean | mitochondrion, nucleus | 55.05 | 52.91 |
| KRH30119 | Soybean | cytosol | 41.41 | 50.93 |
| KRH66052 | Soybean | mitochondrion, nucleus | 57.58 | 50.67 |
| KRG98149 | Soybean | nucleus | 49.49 | 46.01 |
| KRG88863 | Soybean | mitochondrion, nucleus | 32.32 | 45.71 |
| KRH33740 | Soybean | nucleus | 35.35 | 44.03 |
| KRG88914 | Soybean | cytosol | 45.45 | 41.1 |
| CDY33537 | Canola | nucleus | 37.37 | 37.76 |
| KRG97962 | Soybean | nucleus | 43.43 | 35.98 |
| KRH30919 | Soybean | nucleus | 43.94 | 35.95 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 15.15 | 35.29 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 20.71 | 34.45 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 40.91 | 34.32 |
| Solyc01g102260.2.1 | Tomato | nucleus | 41.92 | 33.33 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 36.87 | 33.03 |
| KRH30476 | Soybean | nucleus | 24.24 | 32.0 |
| KRH30473 | Soybean | mitochondrion, nucleus | 35.35 | 31.67 |
| KRG98148 | Soybean | nucleus | 35.35 | 30.57 |
| KRH30472 | Soybean | nucleus | 32.32 | 30.19 |
| KRG98147 | Soybean | mitochondrion, nucleus | 37.88 | 29.18 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 33.84 | 29.13 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 27.78 | 28.95 |
| KRG98143 | Soybean | nucleus | 30.81 | 28.91 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 33.84 | 28.88 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 22.73 | 28.85 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 28.28 | 28.72 |
| KXG28892 | Sorghum | nucleus | 26.26 | 28.11 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 27.78 | 27.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.31 | 26.61 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 21.72 | 26.22 |
| EES10067 | Sorghum | mitochondrion | 27.27 | 26.21 |
| Bra018490.1-P | Field mustard | nucleus | 38.38 | 26.21 |
| CDX97329 | Canola | nucleus | 38.38 | 26.21 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 24.24 | 26.09 |
| Bra029469.1-P | Field mustard | nucleus | 39.9 | 25.99 |
| CDY60402 | Canola | nucleus | 39.9 | 25.99 |
| OQU83806 | Sorghum | nucleus | 22.73 | 25.71 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 30.3 | 25.64 |
| TraesCS7D01G548500.1 | Wheat | plastid | 30.3 | 25.53 |
| KRG98142 | Soybean | nucleus | 34.34 | 25.47 |
| KXG28893 | Sorghum | nucleus | 21.21 | 25.0 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 23.74 | 25.0 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 23.23 | 24.86 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 28.79 | 24.36 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 28.28 | 24.14 |
| AT5G48670.1 | Thale cress | nucleus | 38.89 | 23.99 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 25.25 | 23.7 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 29.29 | 23.11 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 22.22 | 23.04 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 32.32 | 23.02 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 28.28 | 22.86 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 28.79 | 22.71 |
| KRH30471 | Soybean | nucleus | 34.34 | 22.44 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 21.21 | 21.99 |
| Zm00001d016791_P001 | Maize | mitochondrion | 31.82 | 21.95 |
| KXG32310 | Sorghum | nucleus | 26.77 | 21.9 |
| Os03t0582400-01 | Rice | nucleus | 27.27 | 21.69 |
| EES06917 | Sorghum | mitochondrion, nucleus | 28.28 | 21.62 |
| KXG28889 | Sorghum | nucleus | 27.27 | 21.6 |
| Zm00001d048894_P001 | Maize | mitochondrion | 26.77 | 21.46 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 22.73 | 21.33 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 24.24 | 21.15 |
| KRG88862 | Soybean | nucleus | 33.33 | 21.09 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 19.7 | 21.08 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 19.7 | 21.08 |
| KRG98146 | Soybean | nucleus | 34.85 | 21.04 |
| OQU83804 | Sorghum | mitochondrion | 24.75 | 20.85 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 23.74 | 20.7 |
| CDY05207 | Canola | nucleus | 34.85 | 20.66 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 23.74 | 20.52 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 21.21 | 20.49 |
| KXG28890 | Sorghum | mitochondrion | 26.26 | 20.39 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 26.77 | 20.38 |
| KXG38099 | Sorghum | plastid | 32.32 | 20.32 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 21.72 | 20.28 |
| Bra041022.1-P | Field mustard | nucleus | 33.84 | 20.06 |
| CDY27734 | Canola | nucleus | 33.84 | 19.94 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 26.26 | 19.92 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 26.26 | 19.92 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 26.26 | 19.92 |
| KXG28888 | Sorghum | nucleus | 24.75 | 19.22 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 23.74 | 19.18 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 23.74 | 19.18 |
| EER91288 | Sorghum | mitochondrion, nucleus | 30.3 | 19.11 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 23.23 | 19.09 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 22.73 | 19.07 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 21.72 | 18.94 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 23.23 | 18.55 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 21.21 | 18.5 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 21.21 | 18.5 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 22.22 | 18.26 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 21.72 | 17.84 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 21.21 | 17.8 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 21.21 | 17.43 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 20.2 | 16.6 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 23.74 | 15.02 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 24.24 | 14.91 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 23.74 | 14.55 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 23.74 | 14.55 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 22.73 | 14.38 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 21.21 | 13.59 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 20.71 | 13.36 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 20.71 | 13.23 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 23.74 | 12.95 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 20.71 | 11.52 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 19.19 | 11.45 |
Protein Annotations
| EntrezGene:100787546 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02001894 | ncoils:Coil | EnsemblPlantsGene:GLYMA_03G083700 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | UniProt:I1JM47 | InterPro:IPR002100 | InterPro:IPR036879 |
| EnsemblPlants:KRH66114 | ProteinID:KRH66114 | ProteinID:KRH66114.1 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI0002336C6B | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:23308149..23309182
Molecular Weight (calculated)
22483.1 Da
IEP (calculated)
9.078
GRAVY (calculated)
-0.704
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKKVDITY ISNPTKRKAT FKKRKNGLLK KVSEISTLCA TEACAIIYSP DEPAKPEVWP SDQGVKSVIS SFREVSKLEQ SKKMLCQESL LRKNLIKAQE
101: QLKKLKTENR KKEMSLLMSQ YFTIENNLEN SNTVDLNDNS FLADKNLEEI RMKIDMHQPQ EVAPTVEKGG ETMYLGDQGL VNYHVQGPET NGDAMPNL
101: QLKKLKTENR KKEMSLLMSQ YFTIENNLEN SNTVDLNDNS FLADKNLEEI RMKIDMHQPQ EVAPTVEKGG ETMYLGDQGL VNYHVQGPET NGDAMPNL
001: MTRKKLNLSY ITNESMRKAT FNKRKKGLVK KIHELSVLCG IEACAVIYSP FNSNPEVWPS NSEVKNVMEN FEMLTKLEQE KKMVSHEGFI RQNISKTMES
101: NNKKMIDNAE RTMKEAMFQL LSGKGEKLNL TDRNREDLCK YIDQYLKELY HHKNKTINQS HIEPGESSGA TNAMTPTSVV EPIISSIQRP NQNPNFNHLS
201: HNQYQYQQQF GYPILVQDGI YNPSQIQNQH EEWLDDHMMN HSKEISHPLM DDNNFYYQQP
101: NNKKMIDNAE RTMKEAMFQL LSGKGEKLNL TDRNREDLCK YIDQYLKELY HHKNKTINQS HIEPGESSGA TNAMTPTSVV EPIISSIQRP NQNPNFNHLS
201: HNQYQYQQQF GYPILVQDGI YNPSQIQNQH EEWLDDHMMN HSKEISHPLM DDNNFYYQQP
Arabidopsis Description
MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4J9K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.