CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89250
EER90862
EER91288
EER95753
EER97510
EES01631
EES06917
EES07448
EES09201
EES10067
EES16322
KXG19627
KXG23502
KXG26975
KXG28888
KXG28889
KXG28890
KXG28892
KXG28893
KXG32310
KXG37587
KXG37588
KXG38099
OQU78227
OQU83804
OQU83806
OQU93000

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	EER90862	AT1G69120.1	15805477
AT1G31630.1	EER95753	AT1G69120.1	15805477
AT1G31630.1	EER97510	AT1G69120.1	15805477
AT1G31630.1	KXG23502	AT1G69120.1	15805477
AT1G31630.1	EER89250	AT2G03710.1	15805477
AT1G31630.1	OQU93000	AT2G03710.1	15805477
AT1G31630.1	EES07448	AT2G45650.1	15805477
AT1G31630.1	KXG26975	AT2G45650.1	15805477
AT1G31630.1	EER91288	AT5G27960.1	15805477
AT1G31630.1	EES06917	AT5G27960.1	15805477
AT1G31630.1	EES10067	AT5G27960.1	15805477
AT1G31630.1	KXG28888	AT5G27960.1	15805477
AT1G31630.1	KXG28889	AT5G27960.1	15805477
AT1G31630.1	KXG28890	AT5G27960.1	15805477
AT1G31630.1	KXG28892	AT5G27960.1	15805477
AT1G31630.1	KXG28893	AT5G27960.1	15805477
AT1G31630.1	KXG32310	AT5G27960.1	15805477
AT1G31630.1	KXG38099	AT5G27960.1	15805477
AT1G31630.1	OQU83804	AT5G27960.1	15805477
AT1G31630.1	OQU83806	AT5G27960.1	15805477
AT1G31640.1	EER90862	AT1G69120.1	15805477
AT1G31640.1	EER95753	AT1G69120.1	15805477
AT1G31640.1	EER97510	AT1G69120.1	15805477
AT1G31640.1	KXG23502	AT1G69120.1	15805477
AT1G31640.1	EER89250	AT2G03710.1	15805477
AT1G31640.1	OQU93000	AT2G03710.1	15805477
AT1G31640.1	EES07448	AT2G45650.1	15805477
AT1G31640.1	KXG26975	AT2G45650.1	15805477
AT1G31640.1	EER91288	AT5G27960.1	15805477
AT1G31640.1	EES06917	AT5G27960.1	15805477
AT1G31640.1	EES10067	AT5G27960.1	15805477
AT1G31640.1	KXG28888	AT5G27960.1	15805477
AT1G31640.1	KXG28889	AT5G27960.1	15805477
AT1G31640.1	KXG28890	AT5G27960.1	15805477
AT1G31640.1	KXG28892	AT5G27960.1	15805477
AT1G31640.1	KXG28893	AT5G27960.1	15805477
AT1G31640.1	KXG32310	AT5G27960.1	15805477
AT1G31640.1	KXG38099	AT5G27960.1	15805477
AT1G31640.1	OQU83804	AT5G27960.1	15805477
AT1G31640.1	OQU83806	AT5G27960.1	15805477
AT5G27960.1	EER91288	AT1G31630.1	15805477
AT5G27960.1	EES06917	AT1G31630.1	15805477
AT5G27960.1	EES10067	AT1G31630.1	15805477
AT5G27960.1	KXG28888	AT1G31630.1	15805477
AT5G27960.1	KXG28889	AT1G31630.1	15805477
AT5G27960.1	KXG28890	AT1G31630.1	15805477
AT5G27960.1	KXG28892	AT1G31630.1	15805477
AT5G27960.1	KXG28893	AT1G31630.1	15805477
AT5G27960.1	KXG32310	AT1G31630.1	15805477
AT5G27960.1	KXG38099	AT1G31630.1	15805477
AT5G27960.1	OQU83804	AT1G31630.1	15805477
AT5G27960.1	OQU83806	AT1G31630.1	15805477
AT5G27960.1	EER91288	AT1G31640.1	15805477
AT5G27960.1	EES06917	AT1G31640.1	15805477
AT5G27960.1	EES10067	AT1G31640.1	15805477
AT5G27960.1	KXG28888	AT1G31640.1	15805477
AT5G27960.1	KXG28889	AT1G31640.1	15805477
AT5G27960.1	KXG28890	AT1G31640.1	15805477
AT5G27960.1	KXG28892	AT1G31640.1	15805477
AT5G27960.1	KXG28893	AT1G31640.1	15805477
AT5G27960.1	KXG32310	AT1G31640.1	15805477
AT5G27960.1	KXG38099	AT1G31640.1	15805477
AT5G27960.1	OQU83804	AT1G31640.1	15805477
AT5G27960.1	OQU83806	AT1G31640.1	15805477
AT5G27960.1	KXG19627	AT1G77980.1	15805477
AT5G48670.1	EES01631	AT2G41090.1	17360592
AT5G48670.1	EES09201	AT2G41090.1	17360592
AT5G48670.1	EES16322	AT2G41090.1	17360592
AT5G48670.1	OQU78227	AT2G41090.1	17360592
AT5G48670.1	EES01631	AT2G41100.1	17360592
AT5G48670.1	EES09201	AT2G41100.1	17360592
AT5G48670.1	EES16322	AT2G41100.1	17360592
AT5G48670.1	OQU78227	AT2G41100.1	17360592
AT5G48670.1	KXG37587	AT4G14640.1	17360592
AT5G48670.1	KXG37588	AT4G14640.1	17360592
AT5G48670.1	EES01631	AT5G21274.1	17360592
AT5G48670.1	EES09201	AT5G21274.1	17360592
AT5G48670.1	EES16322	AT5G21274.1	17360592
AT5G48670.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013792_P001	Maize	mitochondrion, nucleus	66.56	75.18
Zm00001d016791_P001	Maize	mitochondrion	67.52	73.87
KXG38099	Sorghum	plastid	73.25	73.02
GSMUA_Achr2P18410_001	Banana	nucleus	8.28	63.41
EES06917	Sorghum	mitochondrion, nucleus	43.95	53.28
TraesCS6A01G020500.1	Wheat	mitochondrion, nucleus	24.52	49.36
HORVU6Hr1G003730.1	Barley	nucleus	12.42	45.88
GSMUA_Achr3P08500_001	Banana	nucleus	32.48	44.35
HORVU7Hr1G121600.1	Barley	nucleus	25.8	43.78
TraesCS3A01G312600.1	Wheat	nucleus	34.71	43.43
TraesCS6D01G342000.1	Wheat	nucleus	33.12	43.15
TraesCS6A01G359100.1	Wheat	mitochondrion	35.03	42.15
TraesCS6D01G342100.1	Wheat	mitochondrion	35.03	42.15
TraesCS6B01G391600.1	Wheat	nucleus	32.48	41.63
TraesCS6B01G391700.1	Wheat	nucleus	32.48	41.63
TraesCS6D01G341700.1	Wheat	nucleus	31.85	41.49
HORVU6Hr1G085540.1	Barley	mitochondrion	30.25	41.48
TraesCS6D01G023800.1	Wheat	mitochondrion	29.94	41.41
TraesCS6D01G024000.1	Wheat	mitochondrion, nucleus	24.2	41.3
HORVU6Hr1G085570.1	Barley	mitochondrion, nucleus	34.08	41.15
TraesCS3B01G159600.1	Wheat	nucleus	32.8	41.04
TraesCS6B01G027900.1	Wheat	nucleus	29.62	40.97
TraesCS6B01G391800.1	Wheat	mitochondrion	33.76	40.61
GSMUA_Achr2P18400_001	Banana	nucleus	29.94	40.52
TraesCS6B01G028100.1	Wheat	mitochondrion	24.2	40.43
KXG28892	Sorghum	nucleus	23.57	40.0
TraesCS6B01G028300.1	Wheat	mitochondrion	26.75	39.81
GSMUA_AchrUn_...	Banana	nucleus	29.3	39.48
OQU83806	Sorghum	nucleus	21.97	39.43
TraesCS6A01G358900.1	Wheat	nucleus	29.62	39.41
GSMUA_Achr3P24560_001	Banana	nucleus	28.98	39.22
TraesCS7B01G484600.1	Wheat	nucleus	20.38	39.02
KRG88863	Soybean	mitochondrion, nucleus	17.2	38.57
TraesCS6A01G020900.1	Wheat	mitochondrion	25.48	37.91
EES10067	Sorghum	mitochondrion	24.84	37.86
TraesCS7D01G551000.1	Wheat	nucleus	28.34	37.71
TraesCS7D01G550600.1	Wheat	nucleus	28.34	36.93
TraesCS2B01G171700.1	Wheat	mitochondrion	22.29	36.65
TraesCS2D01G128000.1	Wheat	nucleus	24.52	36.32
TraesCS6D01G341800.1	Wheat	mitochondrion, nucleus	28.66	36.29
KRG89836	Soybean	nucleus	17.2	36.24
TraesCS7D01G550500.1	Wheat	nucleus	21.34	36.22
TraesCS7B01G484500.1	Wheat	nucleus	27.71	36.1
TraesCS7B01G484100.1	Wheat	mitochondrion, nucleus	27.39	35.68
VIT_14s0060g00300.t01	Wine grape	nucleus	26.43	35.17
TraesCS7B01G484000.1	Wheat	nucleus	20.7	35.14
KXG28890	Sorghum	mitochondrion	28.34	34.9
KXG28893	Sorghum	nucleus	18.47	34.52
OQU83804	Sorghum	mitochondrion	25.8	34.47
TraesCS6A01G022700.1	Wheat	mitochondrion	24.84	34.36
TraesCS6D01G024300.1	Wheat	mitochondrion	24.84	34.36
HORVU2Hr1G022060.1	Barley	nucleus, plastid	22.29	34.15
TraesCS7A01G559500.1	Wheat	nucleus	20.7	34.03
KXG28889	Sorghum	nucleus	27.07	34.0
KRG97962	Soybean	nucleus	25.8	33.89
KXG28888	Sorghum	nucleus	27.39	33.73
KXG32310	Sorghum	nucleus	25.8	33.47
KRH30919	Soybean	nucleus	25.48	33.06
KRG98150	Soybean	mitochondrion, nucleus	17.52	32.93
Solyc01g102260.2.1	Tomato	nucleus	26.11	32.93
TraesCS7A01G551000.1	Wheat	nucleus	32.8	32.91
TraesCS7D01G536700.1	Wheat	nucleus	32.8	32.91
KRH33740	Soybean	nucleus	16.56	32.7
GSMUA_Achr8P06150_001	Banana	nucleus	25.16	32.24
Bra024521.1-P	Field mustard	mitochondrion	16.56	32.1
CDY04801	Canola	mitochondrion, nucleus	16.56	32.1
CDY21372	Canola	mitochondrion	16.56	32.1
AT5G27810.1	Thale cress	cytosol, nucleus, plastid	12.1	31.93
PGSC0003DMT400086956	Potato	nucleus	14.65	31.29
KRG98152	Soybean	nucleus	18.79	31.05
AT1G22590.2	Thale cress	mitochondrion, nucleus	15.92	30.67
KRH30476	Soybean	nucleus	14.65	30.67
CDY33537	Canola	nucleus	19.11	30.61
KRH66114	Soybean	nucleus	19.11	30.3
PGSC0003DMT400089787	Potato	cytosol	16.56	29.89
KRH30113	Soybean	nucleus	16.24	29.82
KRH72060	Soybean	nucleus	16.24	29.82
AT5G26630.1	Thale cress	nucleus	20.7	29.82
Bra012335.1-P	Field mustard	mitochondrion	15.29	29.63
CDY25744	Canola	mitochondrion	15.29	29.63
Bra005166.1-P	Field mustard	mitochondrion, nucleus	11.78	29.6
KRH30473	Soybean	mitochondrion, nucleus	20.7	29.41
TraesCS7D01G393000.1	Wheat	nucleus	30.25	29.41
KRH30472	Soybean	nucleus	19.75	29.25
KRG98149	Soybean	nucleus	19.75	29.11
TraesCS7B01G299400.1	Wheat	nucleus	29.94	29.1
TraesCS6A01G359700.1	Wheat	nucleus	20.38	28.19
KRG98143	Soybean	nucleus	18.79	27.96
TraesCS7A01G398800.1	Wheat	nucleus	28.66	27.95
KRG88915	Soybean	mitochondrion, nucleus	18.15	27.54
CDY71896	Canola	nucleus	14.97	27.33
CDY64992	Canola	mitochondrion, nucleus	13.38	27.27
CDX80580	Canola	nucleus	17.52	27.23
KRH30119	Soybean	cytosol	13.69	26.71
KRH66052	Soybean	mitochondrion, nucleus	19.11	26.67
TraesCS6D01G342700.1	Wheat	nucleus	26.11	26.54
Bra020555.1-P	Field mustard	nucleus	18.15	26.39
CDY05540	Canola	nucleus	18.15	26.39
CDY25000	Canola	nucleus	18.15	26.39
KRG98142	Soybean	nucleus	22.29	26.22
KRG98148	Soybean	nucleus	19.11	26.2
CDX88234	Canola	nucleus	14.97	25.68
TraesCS6B01G392600.1	Wheat	nucleus	25.16	25.48
KRH72066	Soybean	mitochondrion, nucleus	16.56	25.24
KRG98147	Soybean	mitochondrion, nucleus	20.38	24.9
Bra009913.1-P	Field mustard	nucleus	15.92	24.63
TraesCS2D01G150900.1	Wheat	mitochondrion	23.89	24.43
Bra029469.1-P	Field mustard	nucleus	23.25	24.01
CDY60402	Canola	nucleus	23.25	24.01
PGSC0003DMT400089454	Potato	nucleus	18.47	23.67
TraesCS2B01G146100.1	Wheat	nucleus	26.75	23.14
AT3G05860.1	Thale cress	nucleus	19.11	23.08
HORVU6Hr1G085670.1	Barley	nucleus	24.2	22.89
PGSC0003DMT400090586	Potato	nucleus	16.88	22.55
Bra018490.1-P	Field mustard	nucleus	20.7	22.41
CDX97329	Canola	nucleus	20.7	22.41
PGSC0003DMT400073719	Potato	nucleus	18.47	22.22
CDY27735	Canola	nucleus	18.79	22.1
AT5G48670.1	Thale cress	nucleus	22.29	21.81
KRH30471	Soybean	nucleus	20.7	21.45
PGSC0003DMT400003073	Potato	cytosol	7.32	21.3
PGSC0003DMT400088489	Potato	nucleus	14.33	21.13
KRG88914	Soybean	cytosol	14.65	21.0
TraesCS2A01G146400.1	Wheat	mitochondrion	23.57	20.79
Bra041022.1-P	Field mustard	nucleus	21.97	20.66
CDY05207	Canola	nucleus	21.97	20.66
CDY27734	Canola	nucleus	21.97	20.54
AT1G65300.1	Thale cress	nucleus	18.15	20.5
AT1G65330.1	Thale cress	nucleus	18.15	20.43
Bra039404.1-P	Field mustard	nucleus	19.43	20.2
PGSC0003DMT400088654	Potato	nucleus	21.02	20.18
PGSC0003DMT400090953	Potato	nucleus	21.34	19.94
KRG88862	Soybean	nucleus	19.75	19.81
CDX88231	Canola	nucleus	17.2	19.57
CDX80577	Canola	mitochondrion, nucleus	18.47	19.27
PGSC0003DMT400091650	Potato	nucleus	15.61	18.92
KRG98146	Soybean	nucleus	19.75	18.9
PGSC0003DMT400095062	Potato	nucleus	16.88	18.79
AT5G35120.1	Thale cress	cytosol	6.37	18.69
PGSC0003DMT400095755	Potato	nucleus	20.38	18.6
CDY38696	Canola	nucleus	16.24	18.35
PGSC0003DMT400061726	Potato	nucleus	18.47	17.74
AT2G28700.1	Thale cress	nucleus	18.47	17.63
PGSC0003DMT400088008	Potato	nucleus	10.83	17.62
AT5G27960.1	Thale cress	nucleus	17.83	17.5
Bra035448.1-P	Field mustard	nucleus	14.65	17.42
AT1G31630.1	Thale cress	mitochondrion	18.79	17.4
Bra035449.1-P	Field mustard	nucleus	14.33	17.05
PGSC0003DMT400087890	Potato	cytosol	6.05	16.96
PGSC0003DMT400090516	Potato	nucleus	9.55	16.95
CDY18830	Canola	nucleus	18.47	16.86
CDY71564	Canola	nucleus	17.83	16.52
Bra009911.1-P	Field mustard	mitochondrion, nucleus	19.11	16.48
PGSC0003DMT400061724	Potato	mitochondrion, nucleus	20.06	16.45
AT5G26650.1	Thale cress	nucleus	19.11	16.39
AT1G59930.1	Thale cress	cytosol	6.69	15.91
PGSC0003DMT400077258	Potato	nucleus	19.75	15.9
Bra020552.1-P	Field mustard	nucleus	17.2	15.84
AT5G26580.1	Thale cress	nucleus	17.2	15.65
CDY70782	Canola	nucleus	15.92	15.48
PGSC0003DMT400095426	Potato	mitochondrion	16.88	15.19
PGSC0003DMT400095417	Potato	cytosol	6.05	14.84
Bra020550.1-P	Field mustard	nucleus	17.52	14.47
Bra040248.1-P	Field mustard	nucleus	18.79	14.29
CDY67043	Canola	nucleus	17.52	14.07
CDY05333	Canola	nucleus	16.56	13.79
PGSC0003DMT400085256	Potato	nucleus	16.56	13.76
CDY05515	Canola	nucleus	16.24	13.53
PGSC0003DMT400085623	Potato	nucleus	8.6	13.5
PGSC0003DMT400086919	Potato	nucleus	10.51	13.41
Bra020525.1-P	Field mustard	nucleus	16.24	12.91
AT1G31640.1	Thale cress	mitochondrion	18.47	12.5
Bra020524.1-P	Field mustard	nucleus	14.01	12.22
CDY05514	Canola	nucleus	14.01	12.22
Solyc07g043080.1.1	Tomato	cytosol	4.78	12.1
PGSC0003DMT400086447	Potato	cytosol	7.32	11.98
PGSC0003DMT400094113	Potato	cytosol	6.05	10.98
PGSC0003DMT400085114	Potato	cytosol, endoplasmic reticulum, nucleus	9.24	10.28
PGSC0003DMT400094378	Potato	nucleus	4.78	9.62
CDY05205	Canola	cytosol, mitochondrion, nucleus	4.78	9.2
PGSC0003DMT400097522	Potato	cytosol, extracellular, mitochondrion, nucleus	2.87	7.69
PGSC0003DMT400089615	Potato	cytosol	5.41	7.14
PGSC0003DMT400085093	Potato	extracellular, plastid, vacuole	4.46	6.97
PGSC0003DMT400091747	Potato	plastid	3.18	6.58
PGSC0003DMT400065010	Potato	vacuole	4.14	6.5
PGSC0003DMT400061722	Potato	plastid	1.91	5.77

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:C5WU72	ncoils:Coil	EnsemblPlants:EER91288	ProteinID:EER91288
ProteinID:EER91288.2	GO:GO:0000982	GO:GO:0000987	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004525	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016442	GO:GO:0016787	GO:GO:0030422	GO:GO:0040029	GO:GO:0045944
GO:GO:0046983	GO:GO:0090501	GO:GO:0090502	InterPro:IPR002100	InterPro:IPR036879	InterPro:MADS_SRF-like
PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF153	SMART:SM00432
EnsemblPlantsGene:SORBI_3001G180600	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI00081AB93D	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:15314759..15315718

Molecular Weight (calculated)

33467.0 Da

IEP (calculated)

8.489

GRAVY (calculated)

-0.380

Length

314 amino acids

Sequence
(BLAST)

001: MARKKVNLQR ILNDATRRAT FRKRRQGLMK KARELATLCD VDACVVVYGE GETRPHVWPD VATAAQVLAR FKAMPELDQY KKTMDMEGLL AQRIDKQQEQ
101: LHKARRENHE RETTLLLHDA IVGRCPGLAG VSVENVAGLG WMVENRLVVV NQSLERRRHQ AQAAAGAGKQ QVQGQPPLQD KDDVVVATAP TTLQLQMPPQ
201: QPLVPAYSIS GGGPAGQADV VHQAPPLNPS PDPEPQPSWL MELASAGDLG ALVYSGFSGG RGMSFGGAGG ASTSTSTSTS ASAGAADMLP PHLGNFGAGF
301: GWPDAPGPSS FPPM

Best Arabidopsis Sequence Match ( AT5G48670.1 )
(BLAST)

001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H

Arabidopsis Description

AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.