Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, extracellular, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 3
  • cytosol 1
  • extracellular 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400091747 Potato plastid 80.34 61.84
PGSC0003DMT400061722 Potato plastid 51.28 57.69
PGSC0003DMT400085093 Potato extracellular, plastid, vacuole 81.2 47.26
PGSC0003DMT400065010 Potato vacuole 79.49 46.5
PGSC0003DMT400085114 Potato cytosol, endoplasmic reticulum, nucleus 78.63 32.62
PGSC0003DMT400089615 Potato cytosol 50.43 24.79
PGSC0003DMT400061724 Potato mitochondrion, nucleus 79.49 24.28
PGSC0003DMT400086919 Potato nucleus 35.9 17.07
PGSC0003DMT400088489 Potato nucleus 29.91 16.43
PGSC0003DMT400094378 Potato nucleus 20.51 15.38
PGSC0003DMT400061726 Potato nucleus 41.88 14.98
PGSC0003DMT400077258 Potato nucleus 49.57 14.87
PGSC0003DMT400090953 Potato nucleus 40.17 13.99
PGSC0003DMT400089454 Potato nucleus 29.06 13.88
PGSC0003DMT400095755 Potato nucleus 40.17 13.66
PGSC0003DMT400088654 Potato nucleus 36.75 13.15
PGSC0003DMT400085256 Potato nucleus 41.03 12.7
PGSC0003DMT400088008 Potato nucleus 17.09 10.36
PGSC0003DMT400073719 Potato nucleus 23.08 10.34
PGSC0003DMT400085623 Potato nucleus 16.24 9.5
PGSC0003DMT400094113 Potato cytosol 11.97 8.09
PGSC0003DMT400086447 Potato cytosol 12.82 7.81
PGSC0003DMT400090516 Potato nucleus 10.26 6.78
PGSC0003DMT400095062 Potato nucleus 15.38 6.38
TraesCS6D01G342000.1 Wheat nucleus 7.69 3.73
TraesCS6B01G391600.1 Wheat nucleus 7.69 3.67
TraesCS6B01G391700.1 Wheat nucleus 7.69 3.67
TraesCS6D01G341700.1 Wheat nucleus 6.84 3.32
Os03t0582400-01 Rice nucleus 6.84 3.21
PGSC0003DMT400095426 Potato mitochondrion 9.4 3.15
TraesCS6A01G358900.1 Wheat nucleus 5.98 2.97
EER91288 Sorghum mitochondrion, nucleus 7.69 2.87
KXG38099 Sorghum plastid 7.69 2.86
Zm00001d016791_P001 Maize mitochondrion 6.84 2.79
HORVU6Hr1G085570.1 Barley mitochondrion, nucleus 5.98 2.69
TraesCS6A01G359100.1 Wheat mitochondrion 5.98 2.68
TraesCS6B01G391800.1 Wheat mitochondrion 5.98 2.68
TraesCS6D01G342100.1 Wheat mitochondrion 5.98 2.68
TraesCS6B01G027900.1 Wheat nucleus 5.13 2.64
TraesCS6D01G023800.1 Wheat mitochondrion 5.13 2.64
GSMUA_Achr3P24560_001 Banana nucleus 5.13 2.59
TraesCS7A01G561000.1 Wheat nucleus 5.13 2.56
PGSC0003DMT400090586 Potato nucleus 5.13 2.55
TraesCS7D01G548500.1 Wheat plastid 5.13 2.55
TraesCS7D01G551000.1 Wheat nucleus 5.13 2.54
Zm00001d013792_P001 Maize mitochondrion, nucleus 5.98 2.52
TraesCS7B01G484100.1 Wheat mitochondrion, nucleus 5.13 2.49
TraesCS7D01G550600.1 Wheat nucleus 5.13 2.49
KXG28888 Sorghum nucleus 5.13 2.35
KXG28890 Sorghum mitochondrion 5.13 2.35
TraesCS7B01G485400.1 Wheat nucleus 4.27 2.14
TraesCS7B01G484500.1 Wheat nucleus 4.27 2.07
KXG32310 Sorghum nucleus 4.27 2.07
Zm00001d048894_P001 Maize mitochondrion 4.27 2.02
KXG28889 Sorghum nucleus 4.27 2.0
EES06917 Sorghum mitochondrion, nucleus 4.27 1.93
TraesCS7A01G551000.1 Wheat nucleus 5.13 1.92
KXG28893 Sorghum nucleus 2.56 1.79
TraesCS6A01G022700.1 Wheat mitochondrion 3.42 1.76
TraesCS6D01G024300.1 Wheat mitochondrion 3.42 1.76
GSMUA_Achr3P08500_001 Banana nucleus 3.42 1.74
GSMUA_AchrUn_... Banana nucleus 3.42 1.72
OQU83806 Sorghum nucleus 2.56 1.71
KXG28892 Sorghum nucleus 2.56 1.62
TraesCS7D01G536700.1 Wheat nucleus 4.27 1.6
TraesCS3A01G312600.1 Wheat nucleus 3.42 1.59
TraesCS3B01G159600.1 Wheat nucleus 3.42 1.59
PGSC0003DMT400091650 Potato nucleus 3.42 1.54
TraesCS2B01G146100.1 Wheat nucleus 4.27 1.38
HORVU6Hr1G085540.1 Barley mitochondrion 2.56 1.31
TraesCS7A01G398800.1 Wheat nucleus 3.42 1.24
TraesCS7B01G299400.1 Wheat nucleus 3.42 1.24
TraesCS7D01G393000.1 Wheat nucleus 3.42 1.24
GSMUA_Achr8P06150_001 Banana nucleus 2.56 1.22
TraesCS6D01G341800.1 Wheat mitochondrion, nucleus 2.56 1.21
HORVU6Hr1G085670.1 Barley nucleus 3.42 1.2
TraesCS2B01G171700.1 Wheat mitochondrion 1.71 1.05
EES10067 Sorghum mitochondrion 1.71 0.97
TraesCS6D01G342700.1 Wheat nucleus 2.56 0.97
TraesCS6A01G020900.1 Wheat mitochondrion 1.71 0.95
TraesCS6B01G028300.1 Wheat mitochondrion 1.71 0.95
TraesCS2D01G128000.1 Wheat nucleus 1.71 0.94
GSMUA_Achr2P18400_001 Banana nucleus 1.71 0.86
OQU83804 Sorghum mitochondrion 1.71 0.85
PGSC0003DMT400086956 Potato nucleus 0.85 0.68
TraesCS6B01G392600.1 Wheat nucleus 1.71 0.65
TraesCS2A01G146400.1 Wheat mitochondrion 1.71 0.56
HORVU7Hr1G121600.1 Barley nucleus 0.85 0.54
TraesCS3D01G138400.1 Wheat cytosol 0.85 0.53
TraesCS3B01G155200.1 Wheat cytosol 0.85 0.51
TraesCS3A01G137500.1 Wheat cytosol 0.85 0.5
HORVU2Hr1G022060.1 Barley nucleus, plastid 0.85 0.49
GSMUA_Achr3P05500_001 Banana nucleus 0.85 0.45
TraesCS2D01G150900.1 Wheat mitochondrion 0.85 0.33
GSMUA_Achr2P18410_001 Banana nucleus 0.0 0.0
HORVU6Hr1G003730.1 Barley nucleus 0.0 0.0
PGSC0003DMT400003073 Potato cytosol 0.0 0.0
PGSC0003DMT400087890 Potato cytosol 0.0 0.0
PGSC0003DMT400089787 Potato cytosol 0.0 0.0
PGSC0003DMT400095417 Potato cytosol 0.0 0.0
TraesCS6A01G020500.1 Wheat mitochondrion, nucleus 0.0 0.0
TraesCS6A01G359700.1 Wheat nucleus 0.0 0.0
TraesCS6B01G028100.1 Wheat mitochondrion 0.0 0.0
TraesCS6D01G024000.1 Wheat mitochondrion, nucleus 0.0 0.0
TraesCS7A01G559500.1 Wheat nucleus 0.0 0.0
TraesCS7B01G484000.1 Wheat nucleus 0.0 0.0
TraesCS7B01G484600.1 Wheat nucleus 0.0 0.0
TraesCS7D01G550500.1 Wheat nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400097522EnsemblPlantsGene:PGSC0003DMG400047093PGSC:PGSC0003DMG400047093UniParc:UPI000295D342UniProt:M1E0T7MapMan:35.2
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400047093]
Coordinates
chr1:-:45691864..45692217
Molecular Weight (calculated)
13023.7 Da
IEP (calculated)
4.145
GRAVY (calculated)
-0.147
Length
117 amino acids
Sequence
(BLAST)
001: MLTLKTPPQM VPLVDLSQVP SLLSSQRYPE MAYPMAYPMS SPMIVPLMAP QIDPSMNIPS ISASMPMENN FNGTFGIPHS PSFSELLSLN DDELMTLLDD
101: TSFDIHVQDP NHHHNNL
Best Arabidopsis Sequence Match ( AT4G39110.1 )
(BLAST)
001: MEIRKKPNIF TVLVIDFSSK PSMALLLAIL LFLSGPSASA VAAAAVGPAT GFKPADDILI DCGSKSSSKT PDGRVFKSDQ ETIQYIEAKE DIQVSAPPSD
101: KVASPIYLTA RIFREEATYK FHLTRPGWHW VRLHFLAFPN DKFDLQQATF SVLTEKYVLL HNFKISNNNN DSQAAVQKEY LVNMTDAQFA LRFRPMKSSA
201: AFINAIEVVS APDELISDSG TALFPVIGFS GLSDYAYQSV YRVNVGGPLI MPQNDTLGRT WIPDKEFLKD ENLAKDVKTT PSAIKYPPEV TPLIAPQTVY
301: ATAVEMANSL TIDPNFNVSW NFPSNPSFNY LIRLHFCDIV SKSLNDLYFN VYINGKTAIS GLDLSTVAGN LAAPYYKDIV VNATLMGPEL QVQIGPMGED
401: TGTKNAILNG VEVLKMSNSV NSLDGEFGVD GRTTGMGKHG MVATAGFVMM FGAFIGLGAM VYKWKKRPQD WQKRNSFSSW LLPIHAGDST FMTSKGGSQK
501: SNFYNSTLGL GRYFSLSELQ EATKNFEASQ IIGVGGFGNV YIGTLDDGTK VAVKRGNPQS EQGITEFQTE IQMLSKLRHR HLVSLIGYCD ENSEMILVYE
601: FMSNGPFRDH LYGKNLAPLT WKQRLEICIG SARGLHYLHT GTAQGIIHRD VKSTNILLDE ALVAKVADFG LSKDVAFGQN HVSTAVKGSF GYLDPEYFRR
701: QQLTDKSDVY SFGVVLLEAL CARPAINPQL PREQVNLAEW AMQWKRKGLL EKIIDPHLAG TINPESMKKF AEAAEKCLED YGVDRPTMGD VLWNLEYALQ
801: LQEAFTQGKA EETENAKPDV VTPGSVPVSD PSPITPSVTT NEAATVPVPA KVEENSGTAV DEHSGTAMFT QFANLNGR
Arabidopsis Description
Probable receptor-like protein kinase At4g39110 [Source:UniProtKB/Swiss-Prot;Acc:Q9T020]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.