Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28892 | Sorghum | nucleus | 59.11 | 78.92 |
| OQU83806 | Sorghum | nucleus | 55.06 | 77.71 |
| EES10067 | Sorghum | mitochondrion | 64.78 | 77.67 |
| KXG28889 | Sorghum | nucleus | 78.54 | 77.6 |
| KXG28893 | Sorghum | nucleus | 52.23 | 76.79 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 10.53 | 63.41 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 31.17 | 33.48 |
| KRH33740 | Soybean | nucleus | 21.46 | 33.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.17 | 33.05 |
| KRG98150 | Soybean | mitochondrion, nucleus | 22.27 | 32.93 |
| KRG88863 | Soybean | mitochondrion, nucleus | 18.22 | 32.14 |
| KRH30476 | Soybean | nucleus | 19.43 | 32.0 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 29.96 | 31.9 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 35.63 | 31.65 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 29.55 | 31.47 |
| Zm00001d016791_P001 | Maize | mitochondrion | 36.03 | 31.01 |
| KRG89836 | Soybean | nucleus | 18.62 | 30.87 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 15.38 | 30.4 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 28.34 | 29.66 |
| CDY21372 | Canola | mitochondrion | 19.03 | 29.01 |
| KRH30113 | Soybean | nucleus | 19.84 | 28.66 |
| KRH30919 | Soybean | nucleus | 27.94 | 28.51 |
| AT5G26630.1 | Thale cress | nucleus | 25.1 | 28.44 |
| Bra024521.1-P | Field mustard | mitochondrion | 18.62 | 28.4 |
| KRH72060 | Soybean | nucleus | 19.43 | 28.07 |
| KRG97962 | Soybean | nucleus | 27.13 | 28.03 |
| CDY71896 | Canola | nucleus | 19.43 | 27.91 |
| PGSC0003DMT400086956 | Potato | nucleus | 16.6 | 27.89 |
| Bra020555.1-P | Field mustard | nucleus | 24.29 | 27.78 |
| CDY04801 | Canola | mitochondrion, nucleus | 18.22 | 27.78 |
| CDY05540 | Canola | nucleus | 24.29 | 27.78 |
| CDY25000 | Canola | nucleus | 24.29 | 27.78 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 27.53 | 27.76 |
| KRH30473 | Soybean | mitochondrion, nucleus | 24.7 | 27.6 |
| KRG98152 | Soybean | nucleus | 20.65 | 26.84 |
| CDX88234 | Canola | nucleus | 19.84 | 26.78 |
| KRH66114 | Soybean | nucleus | 21.46 | 26.77 |
| KRG98149 | Soybean | nucleus | 23.08 | 26.76 |
| KRG98148 | Soybean | nucleus | 24.7 | 26.64 |
| CDY64992 | Canola | mitochondrion, nucleus | 16.6 | 26.62 |
| Bra009913.1-P | Field mustard | nucleus | 21.86 | 26.6 |
| CDX80580 | Canola | nucleus | 21.46 | 26.24 |
| Bra012335.1-P | Field mustard | mitochondrion | 17.0 | 25.93 |
| CDY25744 | Canola | mitochondrion | 17.0 | 25.93 |
| KRG98142 | Soybean | nucleus | 27.94 | 25.84 |
| CDY33537 | Canola | nucleus | 20.24 | 25.51 |
| Solyc01g102260.2.1 | Tomato | nucleus | 25.51 | 25.3 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 16.6 | 25.15 |
| KRG98143 | Soybean | nucleus | 21.46 | 25.12 |
| KRH66052 | Soybean | mitochondrion, nucleus | 22.67 | 24.89 |
| PGSC0003DMT400089787 | Potato | cytosol | 17.0 | 24.14 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 11.34 | 23.53 |
| KRH30472 | Soybean | nucleus | 19.84 | 23.11 |
| KRH30119 | Soybean | cytosol | 14.57 | 22.36 |
| PGSC0003DMT400003073 | Potato | cytosol | 9.72 | 22.22 |
| KRG98147 | Soybean | mitochondrion, nucleus | 23.08 | 22.18 |
| AT5G35120.1 | Thale cress | cytosol | 9.31 | 21.5 |
| AT1G65330.1 | Thale cress | nucleus | 23.48 | 20.79 |
| AT1G65300.1 | Thale cress | nucleus | 23.08 | 20.5 |
| AT3G05860.1 | Thale cress | nucleus | 21.46 | 20.38 |
| KRG88915 | Soybean | mitochondrion, nucleus | 17.0 | 20.29 |
| CDY27735 | Canola | nucleus | 21.86 | 20.22 |
| KRH72066 | Soybean | mitochondrion, nucleus | 16.6 | 19.9 |
| Bra029469.1-P | Field mustard | nucleus | 24.29 | 19.74 |
| CDY60402 | Canola | nucleus | 24.29 | 19.74 |
| Bra018490.1-P | Field mustard | nucleus | 23.08 | 19.66 |
| CDX97329 | Canola | nucleus | 23.08 | 19.66 |
| CDX88231 | Canola | nucleus | 21.86 | 19.57 |
| CDX80577 | Canola | mitochondrion, nucleus | 23.08 | 18.94 |
| PGSC0003DMT400073719 | Potato | nucleus | 19.43 | 18.39 |
| PGSC0003DMT400088489 | Potato | nucleus | 15.79 | 18.31 |
| Bra039404.1-P | Field mustard | nucleus | 22.27 | 18.21 |
| CDY05207 | Canola | nucleus | 24.29 | 17.96 |
| PGSC0003DMT400089454 | Potato | nucleus | 17.81 | 17.96 |
| PGSC0003DMT400090586 | Potato | nucleus | 17.0 | 17.87 |
| Bra041022.1-P | Field mustard | nucleus | 23.89 | 17.66 |
| AT1G59930.1 | Thale cress | cytosol | 9.31 | 17.42 |
| Bra035448.1-P | Field mustard | nucleus | 18.62 | 17.42 |
| Bra035449.1-P | Field mustard | nucleus | 18.62 | 17.42 |
| CDY38696 | Canola | nucleus | 19.43 | 17.27 |
| CDY27734 | Canola | nucleus | 23.48 | 17.26 |
| CDY18830 | Canola | nucleus | 23.89 | 17.15 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 25.1 | 17.03 |
| KRH30471 | Soybean | nucleus | 20.65 | 16.83 |
| AT5G48670.1 | Thale cress | nucleus | 21.86 | 16.82 |
| AT2G28700.1 | Thale cress | nucleus | 22.27 | 16.72 |
| AT5G27960.1 | Thale cress | nucleus | 21.46 | 16.56 |
| AT1G31630.1 | Thale cress | mitochondrion | 22.67 | 16.52 |
| CDY71564 | Canola | nucleus | 22.27 | 16.22 |
| PGSC0003DMT400091650 | Potato | nucleus | 16.6 | 15.83 |
| KRG88862 | Soybean | nucleus | 19.84 | 15.65 |
| KRG98146 | Soybean | nucleus | 20.65 | 15.55 |
| Bra020552.1-P | Field mustard | nucleus | 21.46 | 15.54 |
| PGSC0003DMT400090953 | Potato | nucleus | 21.05 | 15.48 |
| CDY05515 | Canola | nucleus | 23.48 | 15.38 |
| PGSC0003DMT400088654 | Potato | nucleus | 20.24 | 15.29 |
| Bra020525.1-P | Field mustard | nucleus | 24.29 | 15.19 |
| CDY70782 | Canola | nucleus | 19.84 | 15.17 |
| KRG88914 | Soybean | cytosol | 13.36 | 15.07 |
| CDY05333 | Canola | nucleus | 22.67 | 14.85 |
| AT5G26650.1 | Thale cress | nucleus | 21.46 | 14.48 |
| PGSC0003DMT400061726 | Potato | nucleus | 19.03 | 14.37 |
| Bra040248.1-P | Field mustard | nucleus | 23.89 | 14.29 |
| Bra020550.1-P | Field mustard | nucleus | 21.86 | 14.21 |
| PGSC0003DMT400095062 | Potato | nucleus | 16.19 | 14.18 |
| PGSC0003DMT400095755 | Potato | nucleus | 19.43 | 13.95 |
| AT5G26580.1 | Thale cress | nucleus | 19.43 | 13.91 |
| PGSC0003DMT400077258 | Potato | nucleus | 21.05 | 13.33 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 20.65 | 13.32 |
| Bra020524.1-P | Field mustard | nucleus | 19.03 | 13.06 |
| CDY05514 | Canola | nucleus | 19.03 | 13.06 |
| CDY67043 | Canola | nucleus | 20.65 | 13.04 |
| PGSC0003DMT400088008 | Potato | nucleus | 10.12 | 12.95 |
| PGSC0003DMT400085256 | Potato | nucleus | 19.03 | 12.43 |
| AT1G31640.1 | Thale cress | mitochondrion | 22.67 | 12.07 |
| PGSC0003DMT400090516 | Potato | nucleus | 8.5 | 11.86 |
| PGSC0003DMT400087890 | Potato | cytosol | 5.26 | 11.61 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 15.79 | 11.17 |
| PGSC0003DMT400095417 | Potato | cytosol | 5.67 | 10.94 |
| PGSC0003DMT400085623 | Potato | nucleus | 7.69 | 9.5 |
| PGSC0003DMT400086919 | Potato | nucleus | 8.5 | 8.54 |
| PGSC0003DMT400086447 | Potato | cytosol | 6.07 | 7.81 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 4.86 | 7.36 |
| PGSC0003DMT400094378 | Potato | nucleus | 4.05 | 6.41 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 7.29 | 6.38 |
| PGSC0003DMT400094113 | Potato | cytosol | 3.64 | 5.2 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.86 | 5.04 |
| Solyc07g043080.1.1 | Tomato | cytosol | 2.43 | 4.84 |
| PGSC0003DMT400061722 | Potato | plastid | 2.02 | 4.81 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 2.02 | 4.27 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 3.24 | 3.98 |
| PGSC0003DMT400065010 | Potato | vacuole | 2.83 | 3.5 |
| PGSC0003DMT400091747 | Potato | plastid | 2.02 | 3.29 |
Protein Annotations
| EntrezGene:103655057 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:AIB05012.1 | ProteinID:AQK49163.1 | ncoils:Coil |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:K7TUW3 |
| InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000221C286 | EnsemblPlantsGene:Zm00001d048894 |
| EnsemblPlants:Zm00001d048894_P001 | EnsemblPlants:Zm00001d048894_T001 | SEG:seg | : | : | : |
Description
MADS-transcription factor 25Putative MADS-box transcription factor family protein
Coordinates
chr4:+:7243833..7244576
Molecular Weight (calculated)
27534.1 Da
IEP (calculated)
9.611
GRAVY (calculated)
-0.616
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKKVNLQW ISNNATRRAT YKRRTQGLEK KASELATLCG IKLCVVVYGE GEAQPKVWPS HEEAKQLLLK FNGMLDVGSL KKTKNQEEFL HGRSLRLREQ
101: VSKLDLENRE RETLDLLHDS MCGGRLAGGE GRGKDELLSL REMVETKMRR IKARLQQLVG QGVLPPKPPL PAAPSSLQAQ ASCYTYNNMQ SMALLEEHRH
201: SQQDWRAVHN LAPNYSPFAG SSSEPVGCEV TTHPYNNLGA CSGLPSA
101: VSKLDLENRE RETLDLLHDS MCGGRLAGGE GRGKDELLSL REMVETKMRR IKARLQQLVG QGVLPPKPPL PAAPSSLQAQ ASCYTYNNMQ SMALLEEHRH
201: SQQDWRAVHN LAPNYSPFAG SSSEPVGCEV TTHPYNNLGA CSGLPSA
001: MARKKLNLTY IFNDRMRKRS FKQRREGFLK KLNDLKVLCD VNACAVVYNP FNSNPDVWPS KSEVNNIIKK FEMLPETQKK VKSVNHEEFL NLYISKVEKQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
Arabidopsis Description
AGL46AGAMOUS-like 46 [Source:UniProtKB/TrEMBL;Acc:F4IIT6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.