Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029469.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY33537 | Canola | nucleus | 53.29 | 82.65 |
| CDX97329 | Canola | nucleus | 76.64 | 80.34 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 10.2 | 75.61 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 25.33 | 64.71 |
| AT5G48670.1 | Thale cress | nucleus | 67.43 | 63.86 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 45.07 | 58.05 |
| KRG89836 | Soybean | nucleus | 25.66 | 52.35 |
| Solyc01g102260.2.1 | Tomato | nucleus | 42.43 | 51.81 |
| KRH30919 | Soybean | nucleus | 41.12 | 51.65 |
| KRG97962 | Soybean | nucleus | 40.46 | 51.46 |
| KRG88863 | Soybean | mitochondrion, nucleus | 23.68 | 51.43 |
| KRG98152 | Soybean | nucleus | 28.29 | 45.26 |
| CDY05540 | Canola | nucleus | 31.58 | 44.44 |
| CDY25000 | Canola | nucleus | 31.58 | 44.44 |
| KRG98149 | Soybean | nucleus | 30.92 | 44.13 |
| KRH72060 | Soybean | nucleus | 24.67 | 43.86 |
| KRG98150 | Soybean | mitochondrion, nucleus | 23.68 | 43.11 |
| CDY64992 | Canola | mitochondrion, nucleus | 21.71 | 42.86 |
| KRH30119 | Soybean | cytosol | 22.7 | 42.86 |
| KRH30113 | Soybean | nucleus | 24.01 | 42.69 |
| KRH30473 | Soybean | mitochondrion, nucleus | 30.92 | 42.53 |
| KRH30476 | Soybean | nucleus | 20.07 | 40.67 |
| CDX88234 | Canola | nucleus | 24.34 | 40.44 |
| KRH66114 | Soybean | nucleus | 25.99 | 39.9 |
| KRG98142 | Soybean | nucleus | 34.87 | 39.7 |
| CDX80580 | Canola | nucleus | 26.32 | 39.6 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 28.62 | 39.37 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 10.86 | 38.82 |
| KRH30472 | Soybean | nucleus | 26.97 | 38.68 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 28.95 | 37.93 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 19.41 | 37.82 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 28.29 | 37.39 |
| KRG98148 | Soybean | nucleus | 27.96 | 37.12 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 23.03 | 36.84 |
| CDY71896 | Canola | nucleus | 20.72 | 36.63 |
| KRG98143 | Soybean | nucleus | 25.0 | 36.02 |
| CDY05207 | Canola | nucleus | 39.14 | 35.63 |
| KRH66052 | Soybean | mitochondrion, nucleus | 26.32 | 35.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.97 | 35.19 |
| CDY21372 | Canola | mitochondrion | 18.75 | 35.19 |
| CDY27734 | Canola | nucleus | 38.82 | 35.12 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 22.37 | 34.87 |
| CDY04801 | Canola | mitochondrion, nucleus | 18.42 | 34.57 |
| CDY25744 | Canola | mitochondrion | 18.42 | 34.57 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 25.99 | 34.05 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 21.71 | 33.17 |
| KRG98147 | Soybean | mitochondrion, nucleus | 27.96 | 33.07 |
| CDY27735 | Canola | nucleus | 28.62 | 32.58 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 17.43 | 32.32 |
| KRG88915 | Soybean | mitochondrion, nucleus | 21.71 | 31.88 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 19.08 | 31.52 |
| KXG28892 | Sorghum | nucleus | 19.08 | 31.35 |
| OQU83806 | Sorghum | nucleus | 17.76 | 30.86 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 19.08 | 30.85 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 24.67 | 30.61 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 18.42 | 30.27 |
| TraesCS7D01G548500.1 | Wheat | plastid | 23.36 | 30.21 |
| KRH72066 | Soybean | mitochondrion, nucleus | 20.39 | 30.1 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 23.03 | 29.91 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 22.7 | 29.49 |
| KXG28893 | Sorghum | nucleus | 16.12 | 29.17 |
| Os03t0582400-01 | Rice | nucleus | 23.68 | 28.92 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 23.68 | 28.69 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 17.43 | 28.65 |
| EES06917 | Sorghum | mitochondrion, nucleus | 24.34 | 28.57 |
| CDY38696 | Canola | nucleus | 25.99 | 28.42 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 17.76 | 28.27 |
| Zm00001d016791_P001 | Maize | mitochondrion | 26.64 | 28.22 |
| EES10067 | Sorghum | mitochondrion | 19.08 | 28.16 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 17.11 | 28.11 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 25.66 | 28.06 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 19.41 | 27.96 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 23.03 | 27.89 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 20.72 | 27.75 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 20.39 | 27.31 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 18.75 | 27.01 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 23.03 | 26.92 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 23.03 | 26.82 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 16.78 | 26.7 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 22.7 | 26.44 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 22.7 | 26.44 |
| OQU83804 | Sorghum | mitochondrion | 20.39 | 26.38 |
| CDY18830 | Canola | nucleus | 29.61 | 26.16 |
| KRH30471 | Soybean | nucleus | 25.99 | 26.07 |
| KXG28888 | Sorghum | nucleus | 21.71 | 25.88 |
| KXG28890 | Sorghum | mitochondrion | 21.71 | 25.88 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 19.41 | 25.76 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 20.72 | 25.71 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 20.72 | 25.71 |
| KXG28889 | Sorghum | nucleus | 21.05 | 25.6 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 20.07 | 25.31 |
| KXG32310 | Sorghum | nucleus | 20.07 | 25.21 |
| KXG38099 | Sorghum | plastid | 25.99 | 25.08 |
| KRG98146 | Soybean | nucleus | 26.97 | 25.0 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 19.74 | 24.9 |
| KRG88862 | Soybean | nucleus | 25.33 | 24.6 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 19.08 | 24.58 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 19.41 | 24.48 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 16.45 | 24.39 |
| Zm00001d048894_P001 | Maize | mitochondrion | 19.74 | 24.29 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 18.09 | 24.23 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 18.09 | 24.23 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 18.75 | 24.15 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 18.75 | 23.65 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 16.45 | 23.58 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 19.08 | 23.39 |
| KRG88914 | Soybean | cytosol | 16.78 | 23.29 |
| CDX80577 | Canola | mitochondrion, nucleus | 23.03 | 23.26 |
| EER91288 | Sorghum | mitochondrion, nucleus | 24.01 | 23.25 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 18.42 | 23.24 |
| CDX88231 | Canola | nucleus | 21.05 | 23.19 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 16.12 | 21.59 |
| CDY71564 | Canola | nucleus | 23.36 | 20.94 |
| CDY70782 | Canola | nucleus | 21.05 | 19.81 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 20.07 | 19.49 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 19.74 | 19.17 |
| CDY05333 | Canola | nucleus | 23.68 | 19.1 |
| CDY05515 | Canola | nucleus | 23.68 | 19.1 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 10.2 | 19.02 |
| CDY67043 | Canola | nucleus | 23.68 | 18.41 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 19.08 | 17.96 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 17.43 | 17.15 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 18.09 | 17.08 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 17.76 | 16.72 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 16.78 | 16.45 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 15.79 | 15.64 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 16.78 | 15.36 |
| CDY05514 | Canola | nucleus | 17.76 | 15.0 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 16.78 | 14.33 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 16.45 | 13.77 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078J738 | UniProt:A0A078J738 | EnsemblPlants:CDY60402 | ProteinID:CDY60402 |
| ProteinID:CDY60402.1 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00029566001 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI000254277D | SEG:seg | : | : | : | : |
Description
BnaAnng16690DBnaAnng16690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J738]
Coordinates
chrLK033877:+:7080..7994
Molecular Weight (calculated)
34484.0 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.717
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRKKVKLAF IANDSSRKAT FKKRKKGLIK KVNELSTLCG INACAIIYSP YDTNPEVWPS NSGVQRIISD FRKLPEMDQN KKMVDQEAFL RQRIAKASEN
101: LKKQRKDNRE MEMTEVMFQC LVGNMGMFNL NIMDLNDLGY MIDQYLKDVN RRIEILGSSG GGMELGETSN DAAAAPSEAA GTLAIVPTTT DTIQPYHHQQ
201: QHQMFRHHAA PHVGPYEQPL NLNLSHSQNQ QQGFTEMMMN RPEQMSYAAE QMGFPFMNDN HHHHHYHHHQ QVPGESSTTP ATNVSASSAN PVTSSNPTNH
301: IWFR
101: LKKQRKDNRE MEMTEVMFQC LVGNMGMFNL NIMDLNDLGY MIDQYLKDVN RRIEILGSSG GGMELGETSN DAAAAPSEAA GTLAIVPTTT DTIQPYHHQQ
201: QHQMFRHHAA PHVGPYEQPL NLNLSHSQNQ QQGFTEMMMN RPEQMSYAAE QMGFPFMNDN HHHHHYHHHQ QVPGESSTTP ATNVSASSAN PVTSSNPTNH
301: IWFR
001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
Arabidopsis Description
AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.